Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00229 ATGGTGGGGAACGACGACGCGGGTCACCTCTCCGCCTCCCGGAAAATGTTCTGGAGGTCGGCGTCGTGGTCCTCCTCGCGCACCGCCGCCGGGAACGCTTCTTCCGGGGAGGCGGGTAAGGGTTTCGCGGATTCTGGCAGCGTTGAAGGTTCACACGGCCAGAACCGGCGGTTCCCTCCGCCGCCACTGACGCCTCGTTCGCAGCAGAATTGTAAGGCGCGGTCGTGTCTGCCGCCGCTGCAGCCGCTGTCCATCGCCCGGCGGAGTCTTGATGAGTGGCCGAAGGCGGGGTCTGATGACATCGGCGAGTGGCCGCAGCCGCCCACCACCCCCAGCGGGAGAGGTAATGGTAGCAATGGTGAAAGGTTGAAACTTGATTTGTCTTCCATTCAGCATAACAACCCTGATCATGGTAGGAGTAACAATGGTGGGCTTGTGAAGAGGGATAAGATTGCATTTTTTGACAAGGAGTGTTCAAAAGTTGCTGATCATGTGTACCTTGGTGGTGATGCTGTTGCTAGGGATAGGGACATTTTGAAGCATAATGGTATCACTCATGTGTTGAATTGTGTGGGGTTTGTGTGTCCTGAGTACTTTAAGGCTGATTTTGTGTACAGGACTTTGTGGCTGCAGGACAGTCCCTCTGAGGACATTACTAGTATCTTGTATGATGTGTTTGACTACTTTGAGGATGTTAGGGAACAAGGTGGGAGGGTGTTTGTACACTGTTGCCAAGGGGTCTCTAGGTCTACATCTCTGGTAATTGCTTACCTTATGTGGAGGGAAGGCCAAAGTTTTGATGATGCTTTTCAGTTTGTGAAGGCTGCAAGAGGGATTGCTGATCCCAATATGGGGTTTGCTTGCCAGTTGTTGCAGTGCCAGAAAAGGGTCCACGCGTTCCCTCTCAGTCCTAGCTCTTTGCTAAGGATTTACAGGATTGCTCCACACTCCCCTTATGATCCTCTTCATCTTGTTCCCAAAATGTTGATGGATCCTTCTTCAGCTGCATTGGACTCCAGAGGCGCGTTTATTGTGCACATTCCTTCTGCAATATATGTTTGGATTGGTAAGAATTGTGAGGCCATCATGGAGAGGGACGCCAGAGGGGCTGTTGGCCAGATTGTTCGGTATGAGAAGGTGCAAGGGCCAATTGTGATGATCAAGGAAGGCGAGGAACCATCTTACTTCTGGGATGCTTTTTCAAATTTTCTGCCCTTGATGGATAAATCTGGCAATAGGGTAGAAGATAGAAATTTGAGTAGTAAAGTTTTGCCTGGTGAGAGAAGAGTGGAAGCTTATGATGTTGATTATGAAGTTTTCAAGAAAGCAATAATGGGAGGATTTGTGCCTCCCTTTGCCTCATCGGAGAATGAACATGAAACCCATCTGCCTGCAAGAGAGAGTAGTTGGAGTGCTTTAAGGCGTAAAGTTGCCTCTACTAATATGAAGGAGTTTGTTTCCACCCCTAAGTTATCCTTTCCCAGGGTTTATTCAGACTCCATGTTGTGTATTCACACATCAGCAAACCTGTCTCCATCCTCATCCCTTTCATCATCCTCATCATCCATATCATCATCCTCTTCACCCTCTTTTGTTTCTCCCGACTCCATTTCTTCTGATTCTAGCACTCATTCTAAGTTTTTGTCAGAAGTGTCCCCAGATTCTTCCTCCTTGGTTTTGACTCCTGTTCCCGTATCTTCTTCTTTGTCTAGTTTTTCTAATTTGTCAATCTCTTCAAATTCTACTTCTAAAACAGTTTCTAACAGTACAGATATCCTTGGTGTCAAGTTATCACATCCCTGGTCTCAGTCAGCCTCTTTACCATTGAAAAAACCATCAACTTCCCTTGCTGAACGCAGAGGTAGTTTGTCAAAATCCTTGAAGTTGCCACTTAGGAATGATAAGAAACAAGTGATGGATAAGCCATCATCGACCTTTGATAATAGTCAAGAATATGACATTGTTGTTAATGGCAATGTTAGCTATTTGCAACTATCAGAAAGTAAAGATAAATTTTGTGAGTCTAACAACCATGCCAAGGATGGAGGTGTGGATTCATTTCAAAAGTGTGAGCTAGCATTATGTCCAAGCACTGTTGACAGCACTCACCTCAAGGAATCATCACTTGTTCGGAACTCTGTTGAGCCTTTGATAGATAGTTCCTCAGTAGAAGATGCATTGCTTGGTCAGTCTGAAGCATTGGAGGGAACTAATGAGAGTGGCTTACAGCATTTTAATGTCACGGAGACTTCGATATATCACTGGCCCAGTTTACAAAAGATTGAGACATTTGGTTCAGGTCATTTGGATTCTAAAGCTGCTTTTGTCATATTCTCTCCGGGTACGCATGTACATGCAGGGAACATGTTATACATTTGGGTAGGGAGGTCTTTCAATTGTGAAGCTTCACAGGTTCACTTGGATATTGATAACCAGTTAGATTGTTTAGGAGCTGTTGACTGGAATCAAATTGGTTGTGATCTCCTTGTTCGGTTCAGTTTGCCAAAGAATACAGTCTTCAAGGGTTGCTGGGTGGAGCTGATGGTTGGATTTTCTTCTTTCTATGGAACCCGGATAAATGGGAGTTTAAGTAAACTCCAGATGATTGAGTTTCACTAG 2619 0.4563 MVGNDDAGHLSASRKMFWRSASWSSSRTAAGNASSGEAGKGFADSGSVEGSHGQNRRFPPPPLTPRSQQNCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTTPSGRGNGSNGERLKLDLSSIQHNNPDHGRSNNGGLVKRDKIAFFDKECSKVADHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRIYRIAPHSPYDPLHLVPKMLMDPSSAALDSRGAFIVHIPSAIYVWIGKNCEAIMERDARGAVGQIVRYEKVQGPIVMIKEGEEPSYFWDAFSNFLPLMDKSGNRVEDRNLSSKVLPGERRVEAYDVDYEVFKKAIMGGFVPPFASSENEHETHLPARESSWSALRRKVASTNMKEFVSTPKLSFPRVYSDSMLCIHTSANLSPSSSLSSSSSSISSSSSPSFVSPDSISSDSSTHSKFLSEVSPDSSSLVLTPVPVSSSLSSFSNLSISSNSTSKTVSNSTDILGVKLSHPWSQSASLPLKKPSTSLAERRGSLSKSLKLPLRNDKKQVMDKPSSTFDNSQEYDIVVNGNVSYLQLSESKDKFCESNNHAKDGGVDSFQKCELALCPSTVDSTHLKESSLVRNSVEPLIDSSSVEDALLGQSEALEGTNESGLQHFNVTETSIYHWPSLQKIETFGSGHLDSKAAFVIFSPGTHVHAGNMLYIWVGRSFNCEASQVHLDIDNQLDCLGAVDWNQIGCDLLVRFSLPKNTVFKGCWVELMVGFSSFYGTRINGSLSKLQMIEFH* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00229 872 MobiDBLite consensus disorder prediction 603 621 - -
Phac8g00229 872 Pfam Dual specificity phosphatase, catalytic domain 165 295 IPR000340 GO:0008138|GO:0016311
Phac8g00229 872 SUPERFAMILY Actin depolymerizing proteins 305 407 - -
Phac8g00229 872 Gene3D Protein tyrosine phosphatase superfamily 142 299 IPR029021 -
Phac8g00229 872 SMART dsp_5 157 296 IPR020422 GO:0006470|GO:0008138
Phac8g00229 872 MobiDBLite consensus disorder prediction 603 624 - -
Phac8g00229 872 MobiDBLite consensus disorder prediction 94 122 - -
Phac8g00229 872 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 216 277 IPR000387 GO:0016311|GO:0016791
Phac8g00229 872 PANTHER MKPA PROTEIN 12 841 - -
Phac8g00229 872 MobiDBLite consensus disorder prediction 21 78 - -
Phac8g00229 872 MobiDBLite consensus disorder prediction 514 535 - -
Phac8g00229 872 ProSitePatterns Tyrosine specific protein phosphatases active site. 241 251 IPR016130 GO:0016311|GO:0016791
Phac8g00229 872 ProSiteProfiles Dual specificity protein phosphatase domain profile. 157 299 IPR020422 GO:0006470|GO:0008138
Phac8g00229 872 Gene3D Severin 320 404 IPR029006 -
Phac8g00229 872 CDD DSP 158 292 - -
Phac8g00229 872 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 298 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00229 Phac-Chr8 1369203 1372780 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00229 2 193 Protein tyrosine phosphatase (PTP) family AT3G55270 62.500 5.30e-66 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00229 - - vum:124838930 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00229 8 1369203 1372780 Phac8g00229 8 1369203 1372780 ECH