Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00226 ATGTTGGATCTTGACGGGAGAACGGCAGACTGCTGTCATCAGGTTGGAAATTATATTCATAATATGGCCACATTCTTCAGTGGTCTTGTCATTGGCCTTATCAATTGTTGGCAGATTGCTTTGATAACATTAGCGACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAACATATTCCTCCATAGGCTTGCAGAGAATATCCAAGATGCATATGCTGAAGCAGCTGGGATTGCTGAACAGGCAGTTTCCTATATAAGGACATTGTATGCATTTACAAATGAAACTTTGGCCAAGTATTCATATGCAACATCATTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGTCTGGGTCTTGGATTTACATATGGTCTAGCAATATGTTCTTGTGCGTTACAACTCTGGGTTGGAAGATTCTTGGTTATTCATGGAAAAGCGCATGGTGGTGAAATTATAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGATTGAATCAAGCAGCGACAAATTTCTACTCATTTGATCAGGGACGGATAGCTGCTTATAGATTATTTGAGATGATAAGTCGATCACCCTCATCTGTTAATCATGATGGCACAGCCCCTGATTCGGTGCAAGGAAATATAGAATTTCGGAATGTTTATTTCAGCTATCTTTCCCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTCACTGTGCCTGCTAAGAAAGCTGTAGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCTCTCATGGAGCGTTTTTATGATCCTACATTAGGAGAAGTTCTTTTAGACGGTGAAAACATCAAGAATTTGAAACTGGAAATGCTGAGGAGCCAAATAGGATTAGTCACCCAGGAGCCTGCTTTACTCAGTTTGAGTATAAGAGACAACATTGCTTATGGTAGGGATGCTTCCATGGATCAAATTGAAGAGGCGGCTAAAATTGCTCAAGCACATACATTTATCAGCTCATTAGAGAAAGGTTATGACACACAGGTTGGCAGGGCTGGTCTAGCTTTGACTGAAGAGCAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAAGGTGCTCTGGATTTGCTTATGTTGGGACGCTCAACGATAATAATTGCTCGTAGGCTTAGTCTCATAAAGAACGCTGACTATATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCACGATGAATTATTAACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGCGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAAACTGCAGGCTTTCAAATTGAAAAAGATTCTTCAAGTCATAGCTTAAAAGAACCATCTTCCCCTAAAATGACAAAGTCACCCTCTCTTCAAAGAATGTCTAATGTATCCCGACCTCCAGATGGTGTCTTTAACTTGCCAGAATCCCCAAAAGTCCGGAGCCCACCACCTGAGAATATGCTGGATAATGGTCAGCTATGGGATGCAGCAGATAAGGAGCCATCAATAAGAAGGCAGGACAGTTTTGAAATGAGACTTCCGGAGTTACCGAAGATTGATGTTCAGCCTGTGCAGAGACAAATGTCAAATGAATCTGATCCTGAATCTCCAGTTTCACCTCTTTTAACATCTGATCCTAAAAGCGAACGCTCCCATTCACAGACTTTTAGTAGACCACATAGTCATTCTGATGATGTTTCAGTTAAAATGAGACAAACAAAGGGTGCACGGCACCAAAAGCCACCATCACTGCAGAAGCTGGCCGAGCTTAGTTTTACTGAGTGGCTTTACGCAGTGTTAGGAAGCATAGGTGCTGCAATCTTTGGCTCTTTCAACCCCCTTCTTGCTTATGTTATTGGTCTTGTGGTGACAGCTTACTATAGAATTGATGACACTCATCACCTACAACGGGAAGTAGACAAGTGGTGCTTGATCATTGCCTGCATGGGTATTGTGACGGTAGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACGGAAAGAGTTAGGAGGATGATGTTCTCAGCCATGCTACGCAATGAAGTGGGATGGTTTGATGGTGAGGAGAACAGTGCTGACAATTTGTCCATGCGATTGGCCAATGATGCTACTTTTGTGCGAGCTGCTTTTAGCAACAGGCTTTCAATATTTATACAGGACAGTGCTGCAGTTATTGTTGGTCTTCTTATTGGTGCTTTGCTGCATTGGCGTTTAGCACTAGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTTCTGCCATTGCCCAGAAATTTTGGCTTGCTGGATTTTCAAGAGGTATCCAGGAAATGCACAGAAAGGCATCTTTGGTCCTTGAAGATGCAGTTAGGAACATTTATACTGTTGTTGCTTTCTGTGCTGGTAATAAGGTAATGGAGCTGTATAGGCTGCAATTGAAGAAAATATTTAAGCAGAGCTTTCTACATGGGATGGCAATTGGTTTTGCGTTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTGCTACTTTGGTACACTGCAATATGTATAAAGCGAGGTTACATGGATCCACCCACTGCACTCAAAGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTAAAACGACGAAAATCCCTCATATCAGTGTTTGAAATTATTGACCGTGTTCCTAAGATTGACCCTGATGATGGCTCAGCATTGAAGCCATCCAATGTATATGGAAGCATTGAGTTAAAAAATGTTGATTTTTGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTAGCCTCAAAGTCAATGGGGGCCAAACAGTTGCTATTGTGGGAGTTTCAGGATCAGGAAAGAGCACTATCATATCTTTGATTGAGAGATTTTATGATCCAGTTGCAGGCCAAGTTTTCCTGGATGGTAGGGATTTAAAGCTCTATAACTTGAGATGGTTGAGGAGCCACCTTGGTCTTGTTCAGCAGGAACCTATTATCTTTTCAACAACAATAAGGGAAAACATTTTATATGCACGGCATAATGCTACTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCCCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGACGTTGACTTAACCCCAGGACAGAAACAGAGAATTGCAATTGCTAGGGTAGTGCTGAAAAACGCCCCTATCTTATTGTTGGATGAAGCTAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACGCTAATAATGGGAAACAAGACCACTATTTTAATAGCACACAGGGCTGCAATGATGAGGCATGTAGACAATATTGTAGTGCTCAATGGCGGACGGATAGTCGAGGAAGGCAGTCATGATTCATTGGTCGCAAAGAATGGTTTGTATGTCCGATTGATGCAACCTCATTTTGGTAAGACTTTGCGTCATCATCGACTTGTTTAG 3633 0.4181 MLDLDGRTADCCHQVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSPSSVNHDGTAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEMLRSQIGLVTQEPALLSLSIRDNIAYGRDASMDQIEEAAKIAQAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAGFQIEKDSSSHSLKEPSSPKMTKSPSLQRMSNVSRPPDGVFNLPESPKVRSPPPENMLDNGQLWDAADKEPSIRRQDSFEMRLPELPKIDVQPVQRQMSNESDPESPVSPLLTSDPKSERSHSQTFSRPHSHSDDVSVKMRQTKGARHQKPPSLQKLAELSFTEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDDTHHLQREVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDGEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATLPILCVSAIAQKFWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKRGYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDGSALKPSNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVFLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENILYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRDVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKTLRHHRLV* 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00226 1210 MobiDBLite consensus disorder prediction 470 621 - -
Phac8g00226 1210 Gene3D ABC transporter type 1, transmembrane domain 815 958 IPR036640 GO:0005524|GO:0016020
Phac8g00226 1210 Gene3D ABC transporter type 1, transmembrane domain 577 802 IPR036640 GO:0005524|GO:0016020
Phac8g00226 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 951 1197 IPR027417 -
Phac8g00226 1210 Gene3D - 959 1198 IPR027417 -
Phac8g00226 1210 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 961 1198 IPR003439 GO:0005524
Phac8g00226 1210 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 638 930 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g00226 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 449 IPR027417 -
Phac8g00226 1210 Pfam ABC transporter 236 380 IPR003439 GO:0005524
Phac8g00226 1210 MobiDBLite consensus disorder prediction 562 589 - -
Phac8g00226 1210 SUPERFAMILY ABC transporter transmembrane region 13 196 IPR036640 GO:0005524|GO:0016020
Phac8g00226 1210 SUPERFAMILY ABC transporter transmembrane region 625 946 IPR036640 GO:0005524|GO:0016020
Phac8g00226 1210 PANTHER ABC TRANSPORTER B FAMILY 12 649 IPR039421 -
Phac8g00226 1210 FunFam ABC transporter B family member 6 808 958 - -
Phac8g00226 1210 SMART AAA_5 242 421 IPR003593 GO:0016887
Phac8g00226 1210 SMART AAA_5 988 1175 IPR003593 GO:0016887
Phac8g00226 1210 FunFam ABC transporter B family member 6 578 806 - -
Phac8g00226 1210 Gene3D - 205 452 IPR027417 -
Phac8g00226 1210 MobiDBLite consensus disorder prediction 483 504 - -
Phac8g00226 1210 FunFam ABC transporter B family member 20 951 1200 - -
Phac8g00226 1210 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 13 182 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g00226 1210 Pfam ABC transporter transmembrane region 643 907 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g00226 1210 Pfam ABC transporter transmembrane region 18 165 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g00226 1210 MobiDBLite consensus disorder prediction 590 611 - -
Phac8g00226 1210 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 215 450 IPR003439 GO:0005524
Phac8g00226 1210 Pfam ABC transporter 979 1127 IPR003439 GO:0005524
Phac8g00226 1210 FunFam ABC transporter B family member 20 205 452 - -
Phac8g00226 1210 CDD ABC_6TM_Pgp_ABCB1_D2_like 633 944 - -
Phac8g00226 1210 CDD ABC_6TM_Pgp_ABCB1_D1_like 15 190 - -
Phac8g00226 1210 MobiDBLite consensus disorder prediction 537 553 - -
Phac8g00226 1210 Gene3D ABC transporter type 1, transmembrane domain 14 462 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00226 Phac-Chr8 1334247 1343855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00226 13 503 Calmodulin-binding Proteins AT2G36910 46.032 8.98e-127 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00226 K05658 - gmx:100789116 2221.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00226 8 1334247 1343855 Phac8g00226 8 1334247 1343855 ECH