Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00225 ATGATGATATCGAGAGGATTGTTCGGGTGGTCACCGCCGCACGTGCAACCGCTCACGCCGGTTTCGGAGGTGTCGGAGCCGCCGGAGTCGCCGTCGCCGTACCTGGACCCCGGCGCCGAGACTTCGGCGTCGCAGCAGGTGGAGATGGAGGAGGAAATGGAGGAGCTGGAGGAGATCGAACCGCCGCCGGCTGCGGTTCCGTTTTCGCAGCTCTTCGCGTGCGCCGACCGCTTCGATTGGTTCCTCATGACCGTCGGTTCCCTTGCCGCCGCGGCTCATGGCACCGCGCTCGTCATTTACTTGCACTATTTCGCGAAGATCATTCACGTGCTACGGATGGATCCTGAGCCCGGCACGACATCACACGAGCAGTTTCACAGGTTCACCGAGCTTGCTTTAACAATTGTTTATATTGCTGCGGGAGTTTTCGTTGCTGGTTGGATTGAGGTTTCATGTTGGATCTTGACGGGAGAACGGCAGACTGCTGTCATCAGGTCAAATTATGTTCAAGTACTGCTTAATCAAGATATGAGTTTTTTTGATACTTATGGGAACAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGTTGCTTATCCAGTCTGCTCTTAGTGAAAAAGTTGGAAATTATATTCATAATATGGCCACATTCTTCAGTGGTCTTGTCATTGGCCTTATCAATTGTTGGCAGATTGCTTTGATAACATTAGCGACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAACATATTCCTCCATAGGCTTGCAGAGAATATCCAAGATGCATATGCTGAAGCAGCTGGGATTGCTGAACAGGCAGTTTCCTATATAAGGACATTGTATGCATTTACAAATGAAACTTTGGCCAAGTATTCATATGCAACATCATTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGTCTGGGTCTTGGATTTACATATGGTCTAGCAATATGTTCTTGTGCGTTACAACTCTGGGTTGGAAGATTCTTGGTTATTCATGGAAAAGCGCATGGTGGTGAAATTATAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGATTGAATCAAGCAGCGACAAATTTCTACTCATTTGATCAGGGACGGATAGCTGCTTATAGATTATTTGAGATGATAAGTCGATCACCCTCATCTGTTAATCATGATGGCACAGCCCCTGATTCGGTGCAAGGAAATATAGAATTTCGGAATGTTTATTTCAGCTATCTTTCCCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTCACTGTGCCTGCTAAGAAAGCTGTAGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCTCTCATGGAGCGTTTTTATGATCCTACATTAGGAGAAGTTCTTTTAGACGGTGAAAACATCAAGAATTTGAAACTGGAAATGCTGAGGAGCCAAATAGGATTAGTCACCCAGGAGCCTGCTTTACTCAGTTTGAGTATAAGAGACAACATTGCTTATGGTAGGGATGCTTCCATGGATCAAATTGAAGAGGCGGCTAAAATTGCTCAAGCACATACATTTATCAGCTCATTAGAGAAAGGTTATGACACACAGGTTGGCAGGGCTGGTCTAGCTTTGACTGAAGAGCAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAAGGTGCTCTGGATTTGCTTATGTTGGGACGCTCAACGATAATAATTGCTCGTAGGCTTAGTCTCATAAAGAACGCTGACTATATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCACGATGAATTATTAACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGCGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAAACTGCAGGCTTTCAAATTGAAAAAGATTCTTCAAGTCATAGCTTAAAAGAACCATCTTCCCCTAAAATGACAAAGTCACCCTCTCTTCAAAGAATGTCTAATGTATCCCGACCTCCAGATGGTGTCTTTAACTTGCCAGAATCCCCAAAAGTCCGGAGCCCACCACCTGAGAATATGCTGGATAATGGTCAGCTATGGGATGCAGCAGATAAGGAGCCATCAATAAGAAGGCAGGACAGTTTTGAAATGAGACTTCCGGAGTTACCGAAGATTGATGTTCAGCCTGTGCAGAGACAAATGTCAAATGAATCTGATCCTGAATCTCCAGTTTCACCTCTTTTAACATCTGATCCTAAAAGCGAACGCTCCCATTCACAGACTTTTAGTAGACCACATAGTCATTCTGATGATGTTTCAGTTAAAATGAGACAAACAAAGGGTGCACGGCACCAAAAGCCACCATCACTGCAGAAGCTGGCCGAGCTTAGTTTTACTGAGTGGCTTTACGCAGTGTTAGGAAGCATAGGTGCTGCAATCTTTGGCTCTTTCAACCCCCTTCTTGCTTATGTTATTGGTCTTGTGGTGACAGCTTACTATAGAATTGATGACACTCATCACCTACAACGGGAAGTAGACAAGTGGTGCTTGATCATTGCCTGCATGGGTATTGTGACGGTAGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACGGAAAGAGTTAGGAGGATGATGTTCTCAGCCATGCTACGCAATGAAGTGGGATGGTTTGATGGTGAGGAGAACAGTGCTGACAATTTGTCCATGCGATTGGCCAATGATGCTACTTTTGTGCGAGCTGCTTTTAGCAACAGGCTTTCAATATTTATACAGGACAGTGCTGCAGTTATTGTTGGTCTTCTTATTGGTGCTTTGCTGCATTGGCGTTTAGCACTAGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTTCTGCCATTGCCCAGAAATTTTGGCTTGCTGGATTTTCAAGAGGTATCCAGGAAATGCACAGAAAGGCATCTTTGGTCCTTGAAGATGCAGTTAGGAACATTTATACTGTTGTTGCTTTCTGTGCTGGTAATAAGGTAATGGAGCTGTATAGGCTGCAATTGAAGAAAATATTTAAGCAGAGCTTTCTACATGGGATGGCAATTGGTTTTGCGTTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTGCTACTTTGGTACACTGCAATATGTATAAAGCGAGGTTACATGGATCCACCCACTGCACTCAAAGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTAAAACGACGAAAATCCCTCATATCAGTGTTTGAAATTATTGACCGTGTTCCTAAGATTGACCCTGATGATGGCTCAGCATTGAAGCCATCCAATGTATATGGAAGCATTGAGTTAAAAAATGTTGATTTTTGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTAGCCTCAAAGTCAATGGGGGCCAAACAGTTGCTATTGTGGGAGTTTCAGGATCAGGAAAGAGCACTATCATATCTTTGATTGAGAGATTTTATGATCCAGTTGCAGGCCAAGTTTTCCTGGATGGTAGGGATTTAAAGCTCTATAACTTGAGATGGTTGAGGAGCCACCTTGGTCTTGTTCAGCAGGAACCTATTATCTTTTCAACAACAATAAGGGAAAACATTTTATATGCACGGCATAATGCTACTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCCCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGACGTTGACTTAACCCCAGGACAGAAACAGAGAATTGCAATTGCTAGGGTAGTGCTGAAAAACGCCCCTATCTTATTGTTGGATGAAGCTAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACGCTAATAATGGGAAACAAGACCACTATTTTAATAGCACACAGGGCTGCAATGATGAGGCATGTAGACAATATTGTAGTGCTCAATGGCGGACGGATAGTCGAGGAAGGCAGTCATGATTCATTGGTCGCAAAGAATGGTTTGTATGTCCGATTGATGCAACCTCATTTTGGTAAGACTTTGCGTCATCATCGACTTGTTTAG 4212 0.4347 MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQVEMEEEMEELEEIEPPPAAVPFSQLFACADRFDWFLMTVGSLAAAAHGTALVIYLHYFAKIIHVLRMDPEPGTTSHEQFHRFTELALTIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSPSSVNHDGTAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEMLRSQIGLVTQEPALLSLSIRDNIAYGRDASMDQIEEAAKIAQAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAGFQIEKDSSSHSLKEPSSPKMTKSPSLQRMSNVSRPPDGVFNLPESPKVRSPPPENMLDNGQLWDAADKEPSIRRQDSFEMRLPELPKIDVQPVQRQMSNESDPESPVSPLLTSDPKSERSHSQTFSRPHSHSDDVSVKMRQTKGARHQKPPSLQKLAELSFTEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDDTHHLQREVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDGEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATLPILCVSAIAQKFWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKRGYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDGSALKPSNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVFLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENILYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRDVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKTLRHHRLV* 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00225 1403 SUPERFAMILY ABC transporter transmembrane region 71 383 IPR036640 GO:0005524|GO:0016020
Phac8g00225 1403 Gene3D ABC transporter type 1, transmembrane domain 770 997 IPR036640 GO:0005524|GO:0016020
Phac8g00225 1403 Gene3D ABC transporter type 1, transmembrane domain 1008 1151 IPR036640 GO:0005524|GO:0016020
Phac8g00225 1403 Gene3D ABC transporter type 1, transmembrane domain 70 655 IPR036640 GO:0005524|GO:0016020
Phac8g00225 1403 CDD ABC_6TM_Pgp_ABCB1_D2_like 826 1137 - -
Phac8g00225 1403 FunFam ABC transporter B family member 20 398 645 - -
Phac8g00225 1403 MobiDBLite consensus disorder prediction 755 782 - -
Phac8g00225 1403 Gene3D - 398 645 IPR027417 -
Phac8g00225 1403 Pfam ABC transporter 1172 1320 IPR003439 GO:0005524
Phac8g00225 1403 Coils Coil 39 59 - -
Phac8g00225 1403 Pfam ABC transporter 429 573 IPR003439 GO:0005524
Phac8g00225 1403 SUPERFAMILY ABC transporter transmembrane region 818 1139 IPR036640 GO:0005524|GO:0016020
Phac8g00225 1403 MobiDBLite consensus disorder prediction 663 814 - -
Phac8g00225 1403 FunFam ABC transporter B family member 20 70 410 - -
Phac8g00225 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1154 1391 IPR003439 GO:0005524
Phac8g00225 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 831 1123 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g00225 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 642 IPR027417 -
Phac8g00225 1403 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 383 - -
Phac8g00225 1403 FunFam ABC transporter B family member 20 1144 1393 - -
Phac8g00225 1403 FunFam ABC transporter B family member 6 1001 1151 - -
Phac8g00225 1403 MobiDBLite consensus disorder prediction 730 746 - -
Phac8g00225 1403 MobiDBLite consensus disorder prediction 18 46 - -
Phac8g00225 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1144 1390 IPR027417 -
Phac8g00225 1403 MobiDBLite consensus disorder prediction 783 804 - -
Phac8g00225 1403 PANTHER ABC TRANSPORTER B FAMILY 48 843 IPR039421 -
Phac8g00225 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 408 643 IPR003439 GO:0005524
Phac8g00225 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 85 375 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g00225 1403 Pfam ABC transporter transmembrane region 85 358 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g00225 1403 Pfam ABC transporter transmembrane region 836 1100 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g00225 1403 FunFam ABC transporter B family member 6 771 999 - -
Phac8g00225 1403 Gene3D - 1152 1391 IPR027417 -
Phac8g00225 1403 SMART AAA_5 1181 1368 IPR003593 GO:0016887
Phac8g00225 1403 SMART AAA_5 435 614 IPR003593 GO:0016887
Phac8g00225 1403 MobiDBLite consensus disorder prediction 676 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00225 Phac-Chr8 1334247 1343855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00225 59 700 Calmodulin-binding Proteins AT2G36910 43.492 9.50e-164 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00225 K05658 - gmx:100779000 2568.11