Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac8g00225 | ATGATGATATCGAGAGGATTGTTCGGGTGGTCACCGCCGCACGTGCAACCGCTCACGCCGGTTTCGGAGGTGTCGGAGCCGCCGGAGTCGCCGTCGCCGTACCTGGACCCCGGCGCCGAGACTTCGGCGTCGCAGCAGGTGGAGATGGAGGAGGAAATGGAGGAGCTGGAGGAGATCGAACCGCCGCCGGCTGCGGTTCCGTTTTCGCAGCTCTTCGCGTGCGCCGACCGCTTCGATTGGTTCCTCATGACCGTCGGTTCCCTTGCCGCCGCGGCTCATGGCACCGCGCTCGTCATTTACTTGCACTATTTCGCGAAGATCATTCACGTGCTACGGATGGATCCTGAGCCCGGCACGACATCACACGAGCAGTTTCACAGGTTCACCGAGCTTGCTTTAACAATTGTTTATATTGCTGCGGGAGTTTTCGTTGCTGGTTGGATTGAGGTTTCATGTTGGATCTTGACGGGAGAACGGCAGACTGCTGTCATCAGGTCAAATTATGTTCAAGTACTGCTTAATCAAGATATGAGTTTTTTTGATACTTATGGGAACAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGTTGCTTATCCAGTCTGCTCTTAGTGAAAAAGTTGGAAATTATATTCATAATATGGCCACATTCTTCAGTGGTCTTGTCATTGGCCTTATCAATTGTTGGCAGATTGCTTTGATAACATTAGCGACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAACATATTCCTCCATAGGCTTGCAGAGAATATCCAAGATGCATATGCTGAAGCAGCTGGGATTGCTGAACAGGCAGTTTCCTATATAAGGACATTGTATGCATTTACAAATGAAACTTTGGCCAAGTATTCATATGCAACATCATTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGTCTGGGTCTTGGATTTACATATGGTCTAGCAATATGTTCTTGTGCGTTACAACTCTGGGTTGGAAGATTCTTGGTTATTCATGGAAAAGCGCATGGTGGTGAAATTATAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGATTGAATCAAGCAGCGACAAATTTCTACTCATTTGATCAGGGACGGATAGCTGCTTATAGATTATTTGAGATGATAAGTCGATCACCCTCATCTGTTAATCATGATGGCACAGCCCCTGATTCGGTGCAAGGAAATATAGAATTTCGGAATGTTTATTTCAGCTATCTTTCCCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTCACTGTGCCTGCTAAGAAAGCTGTAGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCTCTCATGGAGCGTTTTTATGATCCTACATTAGGAGAAGTTCTTTTAGACGGTGAAAACATCAAGAATTTGAAACTGGAAATGCTGAGGAGCCAAATAGGATTAGTCACCCAGGAGCCTGCTTTACTCAGTTTGAGTATAAGAGACAACATTGCTTATGGTAGGGATGCTTCCATGGATCAAATTGAAGAGGCGGCTAAAATTGCTCAAGCACATACATTTATCAGCTCATTAGAGAAAGGTTATGACACACAGGTTGGCAGGGCTGGTCTAGCTTTGACTGAAGAGCAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAAGGTGCTCTGGATTTGCTTATGTTGGGACGCTCAACGATAATAATTGCTCGTAGGCTTAGTCTCATAAAGAACGCTGACTATATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCACGATGAATTATTAACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGCGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAAACTGCAGGCTTTCAAATTGAAAAAGATTCTTCAAGTCATAGCTTAAAAGAACCATCTTCCCCTAAAATGACAAAGTCACCCTCTCTTCAAAGAATGTCTAATGTATCCCGACCTCCAGATGGTGTCTTTAACTTGCCAGAATCCCCAAAAGTCCGGAGCCCACCACCTGAGAATATGCTGGATAATGGTCAGCTATGGGATGCAGCAGATAAGGAGCCATCAATAAGAAGGCAGGACAGTTTTGAAATGAGACTTCCGGAGTTACCGAAGATTGATGTTCAGCCTGTGCAGAGACAAATGTCAAATGAATCTGATCCTGAATCTCCAGTTTCACCTCTTTTAACATCTGATCCTAAAAGCGAACGCTCCCATTCACAGACTTTTAGTAGACCACATAGTCATTCTGATGATGTTTCAGTTAAAATGAGACAAACAAAGGGTGCACGGCACCAAAAGCCACCATCACTGCAGAAGCTGGCCGAGCTTAGTTTTACTGAGTGGCTTTACGCAGTGTTAGGAAGCATAGGTGCTGCAATCTTTGGCTCTTTCAACCCCCTTCTTGCTTATGTTATTGGTCTTGTGGTGACAGCTTACTATAGAATTGATGACACTCATCACCTACAACGGGAAGTAGACAAGTGGTGCTTGATCATTGCCTGCATGGGTATTGTGACGGTAGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACGGAAAGAGTTAGGAGGATGATGTTCTCAGCCATGCTACGCAATGAAGTGGGATGGTTTGATGGTGAGGAGAACAGTGCTGACAATTTGTCCATGCGATTGGCCAATGATGCTACTTTTGTGCGAGCTGCTTTTAGCAACAGGCTTTCAATATTTATACAGGACAGTGCTGCAGTTATTGTTGGTCTTCTTATTGGTGCTTTGCTGCATTGGCGTTTAGCACTAGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTTCTGCCATTGCCCAGAAATTTTGGCTTGCTGGATTTTCAAGAGGTATCCAGGAAATGCACAGAAAGGCATCTTTGGTCCTTGAAGATGCAGTTAGGAACATTTATACTGTTGTTGCTTTCTGTGCTGGTAATAAGGTAATGGAGCTGTATAGGCTGCAATTGAAGAAAATATTTAAGCAGAGCTTTCTACATGGGATGGCAATTGGTTTTGCGTTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTGCTACTTTGGTACACTGCAATATGTATAAAGCGAGGTTACATGGATCCACCCACTGCACTCAAAGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTAAAACGACGAAAATCCCTCATATCAGTGTTTGAAATTATTGACCGTGTTCCTAAGATTGACCCTGATGATGGCTCAGCATTGAAGCCATCCAATGTATATGGAAGCATTGAGTTAAAAAATGTTGATTTTTGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTAGCCTCAAAGTCAATGGGGGCCAAACAGTTGCTATTGTGGGAGTTTCAGGATCAGGAAAGAGCACTATCATATCTTTGATTGAGAGATTTTATGATCCAGTTGCAGGCCAAGTTTTCCTGGATGGTAGGGATTTAAAGCTCTATAACTTGAGATGGTTGAGGAGCCACCTTGGTCTTGTTCAGCAGGAACCTATTATCTTTTCAACAACAATAAGGGAAAACATTTTATATGCACGGCATAATGCTACTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCCCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGACGTTGACTTAACCCCAGGACAGAAACAGAGAATTGCAATTGCTAGGGTAGTGCTGAAAAACGCCCCTATCTTATTGTTGGATGAAGCTAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACGCTAATAATGGGAAACAAGACCACTATTTTAATAGCACACAGGGCTGCAATGATGAGGCATGTAGACAATATTGTAGTGCTCAATGGCGGACGGATAGTCGAGGAAGGCAGTCATGATTCATTGGTCGCAAAGAATGGTTTGTATGTCCGATTGATGCAACCTCATTTTGGTAAGACTTTGCGTCATCATCGACTTGTTTAG | 4212 | 0.4347 | MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQVEMEEEMEELEEIEPPPAAVPFSQLFACADRFDWFLMTVGSLAAAAHGTALVIYLHYFAKIIHVLRMDPEPGTTSHEQFHRFTELALTIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSPSSVNHDGTAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEMLRSQIGLVTQEPALLSLSIRDNIAYGRDASMDQIEEAAKIAQAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAGFQIEKDSSSHSLKEPSSPKMTKSPSLQRMSNVSRPPDGVFNLPESPKVRSPPPENMLDNGQLWDAADKEPSIRRQDSFEMRLPELPKIDVQPVQRQMSNESDPESPVSPLLTSDPKSERSHSQTFSRPHSHSDDVSVKMRQTKGARHQKPPSLQKLAELSFTEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDDTHHLQREVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDGEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATLPILCVSAIAQKFWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKRGYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDGSALKPSNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVFLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENILYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRDVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKTLRHHRLV* | 1404 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac8g00225 | 1403 | SUPERFAMILY | ABC transporter transmembrane region | 71 | 383 | IPR036640 | GO:0005524|GO:0016020 | |
Phac8g00225 | 1403 | Gene3D | ABC transporter type 1, transmembrane domain | 770 | 997 | IPR036640 | GO:0005524|GO:0016020 | |
Phac8g00225 | 1403 | Gene3D | ABC transporter type 1, transmembrane domain | 1008 | 1151 | IPR036640 | GO:0005524|GO:0016020 | |
Phac8g00225 | 1403 | Gene3D | ABC transporter type 1, transmembrane domain | 70 | 655 | IPR036640 | GO:0005524|GO:0016020 | |
Phac8g00225 | 1403 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 826 | 1137 | - | - | |
Phac8g00225 | 1403 | FunFam | ABC transporter B family member 20 | 398 | 645 | - | - | |
Phac8g00225 | 1403 | MobiDBLite | consensus disorder prediction | 755 | 782 | - | - | |
Phac8g00225 | 1403 | Gene3D | - | 398 | 645 | IPR027417 | - | |
Phac8g00225 | 1403 | Pfam | ABC transporter | 1172 | 1320 | IPR003439 | GO:0005524 | |
Phac8g00225 | 1403 | Coils | Coil | 39 | 59 | - | - | |
Phac8g00225 | 1403 | Pfam | ABC transporter | 429 | 573 | IPR003439 | GO:0005524 | |
Phac8g00225 | 1403 | SUPERFAMILY | ABC transporter transmembrane region | 818 | 1139 | IPR036640 | GO:0005524|GO:0016020 | |
Phac8g00225 | 1403 | MobiDBLite | consensus disorder prediction | 663 | 814 | - | - | |
Phac8g00225 | 1403 | FunFam | ABC transporter B family member 20 | 70 | 410 | - | - | |
Phac8g00225 | 1403 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1154 | 1391 | IPR003439 | GO:0005524 | |
Phac8g00225 | 1403 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 831 | 1123 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Phac8g00225 | 1403 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 398 | 642 | IPR027417 | - | |
Phac8g00225 | 1403 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 83 | 383 | - | - | |
Phac8g00225 | 1403 | FunFam | ABC transporter B family member 20 | 1144 | 1393 | - | - | |
Phac8g00225 | 1403 | FunFam | ABC transporter B family member 6 | 1001 | 1151 | - | - | |
Phac8g00225 | 1403 | MobiDBLite | consensus disorder prediction | 730 | 746 | - | - | |
Phac8g00225 | 1403 | MobiDBLite | consensus disorder prediction | 18 | 46 | - | - | |
Phac8g00225 | 1403 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1144 | 1390 | IPR027417 | - | |
Phac8g00225 | 1403 | MobiDBLite | consensus disorder prediction | 783 | 804 | - | - | |
Phac8g00225 | 1403 | PANTHER | ABC TRANSPORTER B FAMILY | 48 | 843 | IPR039421 | - | |
Phac8g00225 | 1403 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 408 | 643 | IPR003439 | GO:0005524 | |
Phac8g00225 | 1403 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 85 | 375 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Phac8g00225 | 1403 | Pfam | ABC transporter transmembrane region | 85 | 358 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Phac8g00225 | 1403 | Pfam | ABC transporter transmembrane region | 836 | 1100 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Phac8g00225 | 1403 | FunFam | ABC transporter B family member 6 | 771 | 999 | - | - | |
Phac8g00225 | 1403 | Gene3D | - | 1152 | 1391 | IPR027417 | - | |
Phac8g00225 | 1403 | SMART | AAA_5 | 1181 | 1368 | IPR003593 | GO:0016887 | |
Phac8g00225 | 1403 | SMART | AAA_5 | 435 | 614 | IPR003593 | GO:0016887 | |
Phac8g00225 | 1403 | MobiDBLite | consensus disorder prediction | 676 | 697 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac8g00225 | Phac-Chr8 | 1334247 | 1343855 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac8g00225 | 59 | 700 | Calmodulin-binding Proteins | AT2G36910 | 43.492 | 9.50e-164 | 525 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac8g00225 | K05658 | - | gmx:100779000 | 2568.11 |