Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00220 ATGAAGAGAGAAAGAGAGGTTGACAGTGTAAGCATGGCGAATTGTTTGATGTTGCTCTCTCGTGGAGGTGAATTTGAGGCCTCATACTCAAGCTCTTCTTCTTCCATGAGCAACCGTGTGTTTGAGTGCAAGACATGCAATAGACAATTCCCTTCTTTTCAAGCACTTGGTGGGCACAGGGCTAGTCACAAGAAACCTAGGTTGATGGCAAGTGAAGGAGAATTGCTTCATGATTCACCTGCAAAGCCTAAGACTCATGAGTGTTCCATTTGTGGATTGGAGTTTGCTATAGGGCAAGCCTTGGGAGGGCACATGAGGAGACACAGAGCTGCAAATTTGAACAATTCCACCACTATCAGCAGCAGTAGTGGTGGTAGCAGTGTTGATTCTTCAAGCAAGAACAACAAGAGAGTTTTGGTTTTGGATTTGAATTTGACACCCTTTGAGAATGATTTGGAGATTTTGAAGATGAGAAAACCAACTACTTTGGTTGATTATTTGTATTAG 507 0.428 MKREREVDSVSMANCLMLLSRGGEFEASYSSSSSSMSNRVFECKTCNRQFPSFQALGGHRASHKKPRLMASEGELLHDSPAKPKTHECSICGLEFAIGQALGGHMRRHRAANLNNSTTISSSSGGSSVDSSSKNNKRVLVLDLNLTPFENDLEILKMRKPTTLVDYLY* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00220 168 Gene3D Classic Zinc Finger 38 108 - -
Phac8g00220 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Phac8g00220 168 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Phac8g00220 168 PANTHER ZINC FINGER PROTEIN ZAT5 6 150 - -
Phac8g00220 168 Pfam C2H2-type zinc finger 86 110 - -
Phac8g00220 168 Pfam C2H2-type zinc finger 40 66 - -
Phac8g00220 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Phac8g00220 168 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Phac8g00220 168 SMART c2h2final6 41 63 IPR013087 -
Phac8g00220 168 SMART c2h2final6 86 108 IPR013087 -
Phac8g00220 168 SUPERFAMILY beta-beta-alpha zinc fingers 39 108 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00220 Phac-Chr8 1307670 1308423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00220 1 155 C2H2 Transcription Factor Family AT2G37430 44.785 3.21e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac8g00220 zf-C2H2_6 8.2e-10 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00220 8 1307670 1308423 Phac8g00220 8 1307670 1308423 ECH