Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00216 ATGCCACGGGATGCTGGCTGCATGGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAATTGAACCCAAGCGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATAGTCAGCAACAAGAAACAAGCAGTTGAAGATGTTAGTGGTAGGCCAATTTCGGGAGTTTCACATGTGAATGTTTCCCAATGGGACACCAGTTCAGGATTTCACTCTGTTATGGGTCAATTTTCTGACCGACTTTTTGGATCTGATCTTGCTAGGACTGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTTAGTGGAAATATGAACATGGGAAGGAAGGATTTTGAGCACCAATATGGTAATGATCCTTCGGTGGGATTGTCAATATCTCATTCCATTGCAGATCCGTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATTCTGACAATTGCATGCCTTCTGCGGCCATGGGGCACTCCTATAGCAGGGAAGATAATAGTACAATTTCAGTAGGTGCTGGCTACAACAAGAATGATGGCAATATTTCGTTGGGTCCTACTTATAACCATAGAAATGACAACACCATTGGTATGGGGTCTAGAATAAGTAGTAAGACTGATGACAATCTTCTTTCAGTGGCTCACAACTTCAATAAAGGGGATGGGGGCTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATCTTATCAATGGGTCAGCCCTTTGACAAGGGAGATGGGAATTTCATATCAATGGGTCAATCATATGAGAAAGAAGATGGGAATTTAATATCTCTGGGCACCTCATATTCCAAGGGGCATGAGAGCTTTATATCAATTGGTTCAACCTTTGGTAAATCAGGAGAGAATTTCATTACTGTTGCTCCTTATGACAAGGGTACCGATCATTTAATATCAATGGGTCCAACATATGATAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATACGACAGAGGAGATTCTAGTTCTTTACCTGTGGGTCAAAATCACCATAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCATGATGACCCTGAAGCAAATCCCTCTGGTGGAATCATTAGTGGCTATGATCTGTTGATAGGAAACCAGAACTCAGCTCAAGGTTTGGATAGTCAGAATGATCTGAGTGAAACAAACACTGAATCACTTGTAAATAGCATTCCAAAGCTCAATACTAAAAATGATATTGTTGTTAAGAACAAAGAGCCTAAGACAACAACCAAGAAGGCTCCTACGAACAACTTCCCTTCAAATGTCAAAAGTTTACTGTCAACCGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAATCATAAAAGGAACAGGGTATTTGTGTTCATGTGACGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCCAATAATCACATATACTTCGAGAATGGAAAAACTATATATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAATATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATTTACGGAAAGGATGAAGTGATAATTCCGTCTTGA 1725 0.4023 MPRDAGCMAEENVGYENSSRIEPKRSHQWFMDTGEPEIVSNKKQAVEDVSGRPISGVSHVNVSQWDTSSGFHSVMGQFSDRLFGSDLARTVNLVDKNVPSIVSGNMNMGRKDFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPSAAMGHSYSREDNSTISVGAGYNKNDGNISLGPTYNHRNDNTIGMGSRISSKTDDNLLSVAHNFNKGDGGFMLMGHNYGKGDESILSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYSKGHESFISIGSTFGKSGENFITVAPYDKGTDHLISMGPTYDKVDSNIASTVPSYDRGDSSSLPVGQNHHKGQSSTISFGGFHDDPEANPSGGIISGYDLLIGNQNSAQGLDSQNDLSETNTESLVNSIPKLNTKNDIVVKNKEPKTTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVIIPS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00216 574 PANTHER AUTOIMMUNE REGULATOR 6 522 - -
Phac8g00216 574 Pfam Tify domain binding domain 467 522 IPR032308 -
Phac8g00216 574 MobiDBLite consensus disorder prediction 331 367 - -
Phac8g00216 574 MobiDBLite consensus disorder prediction 331 359 - -
Phac8g00216 574 SUPERFAMILY Porins 164 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00216 Phac-Chr8 1293734 1301080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00216 429 555 PHD Transcription Factor Family AT3G53680 55.906 1.13e-40 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00216 - - gmx:100782217 1059.67