Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00215 ATGTCCTACCAACATAAAAGCTTTTGGATGCCACGGGATGCTGGCTGCATGGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAATTGAACCCAAGCGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATAGTCAGCAACAAGAAACAAGCAGTTGAAGATGTTAGTGGTAGGCCAATTTCGGGAGTTTCACATGTGAATGTTTCCCAATGGGACACCAGTTCAGGATTTCACTCTGTTATGGGTCAATTTTCTGACCGACTTTTTGGATCTGATCTTGCTAGGACTGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTTAGTGGAAATATGAACATGGGAAGGAAGGATTTTGAGCACCAATATGGTAATGATCCTTCGGTGGGATTGTCAATATCTCATTCCATTGCAGATCCGTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATTCTGACAATTGCATGCCTTCTGCGGCCATGGGGCACTCCTATAGCAGGGAAGATAATAGTACAATTTCAGTAGGTGCTGGCTACAACAAGAATGATGGCAATATTTCGTTGGGTCCTACTTATAACCATAGAAATGACAACACCATTGGTATGGGGTCTAGAATAAGTAGTAAGACTGATGACAATCTTCTTTCAGTGGCTCACAACTTCAATAAAGGGGATGGGGGCTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATCTTATCAATGGGTCAGCCCTTTGACAAGGGAGATGGGAATTTCATATCAATGGGTCAATCATATGAGAAAGAAGATGGGAATTTAATATCTCTGGGCACCTCATATTCCAAGGGGCATGAGAGCTTTATATCAATTGGTTCAACCTTTGGTAAATCAGGAGAGAATTTCATTACTGTTGCTCCTTATGACAAGGGTACCGATCATTTAATATCAATGGGTCCAACATATGATAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATACGACAGAGGAGATTCTAGTTCTTTACCTGTGGGTCAAAATCACCATAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCATGATGACCCTGAAGCAAATCCCTCTGGTGGAATCATTAGTGGCTATGATCTGTTGATAGGAAACCAGAACTCAGCTCAAGGTTTGGATAGTCAGAATGATCTGAGTGAAACAAACACTGAATCACTTGTAAATAGCATTCCAAAGCTCAATACTAAAAATGATATTGTTGTTAAGAACAAAGAGCCTAAGACAACAACCAAGAAGGCTCCTACGAACAACTTCCCTTCAAATGTCAAAAGTTTACTGTCAACCGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAATCATAAAAGGAACAGGGTATTTGTGTTCATGTGACGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCCAATAATCACATATACTTCGAGAATGGAAAAACTATATATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAATATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATTTACGGAAAGGATGAAGTGATAATTCCGTCTTGA 1752 0.4018 MSYQHKSFWMPRDAGCMAEENVGYENSSRIEPKRSHQWFMDTGEPEIVSNKKQAVEDVSGRPISGVSHVNVSQWDTSSGFHSVMGQFSDRLFGSDLARTVNLVDKNVPSIVSGNMNMGRKDFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPSAAMGHSYSREDNSTISVGAGYNKNDGNISLGPTYNHRNDNTIGMGSRISSKTDDNLLSVAHNFNKGDGGFMLMGHNYGKGDESILSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYSKGHESFISIGSTFGKSGENFITVAPYDKGTDHLISMGPTYDKVDSNIASTVPSYDRGDSSSLPVGQNHHKGQSSTISFGGFHDDPEANPSGGIISGYDLLIGNQNSAQGLDSQNDLSETNTESLVNSIPKLNTKNDIVVKNKEPKTTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVIIPS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00215 583 Pfam Tify domain binding domain 476 531 IPR032308 -
Phac8g00215 583 MobiDBLite consensus disorder prediction 340 368 - -
Phac8g00215 583 MobiDBLite consensus disorder prediction 340 376 - -
Phac8g00215 583 SUPERFAMILY Porins 173 297 - -
Phac8g00215 583 PANTHER AUTOIMMUNE REGULATOR 8 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00215 Phac-Chr8 1293734 1301080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00215 438 564 PHD Transcription Factor Family AT3G53680 55.906 1.15e-40 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00215 - - gmx:100782217 1080.86