Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00170 ATGGCAGAACAAAAGAAGGAATGGGCTGTGGGAATTGACCTTGGCACAACATACTCATGTGTTGCTGTATGGCTAGAGGAACAATGTCGAGTGGAGATCATTCACAATGACCAGGGCAATAGAACTACGCCTTCATCTGTGGCCTTCACAGAGAATCAAAGATTGATCGGTGATGCTGCTAAAAATCAGGCTGCCACTAACCCAACTAACACTGTCTTTGATGTGAAAAGGTTAATCGGCAGAAGATTCAGTGATCCCATTATCCGGGACGATCTAAAGTTGTGGCCATTTAAGGTCATTGCTGATTCTGATGACAAACCCATGATAGCTGTTTTATACAAGGGTCAGAAGAAACACATTTCAGCTGAAGAAATCTCATCTATGATTCTCACAAAGATGCGGGAGACTGCAGAAGCGTACTTGGAATCAGGGGTTAAGAATGTTGTGGTTACTGTGCCTGCTTATTTTAATGACTCTCAGCGACAAGCAACCAAAGATGCTGGTACCATTGCTGGACTCAATGTCATGCGGATAATCAATGAGCCCACAGCTGCAGCTCTGGCATACGGCCTTGACAAGAGAGCAAAATGTGTTGTTGGAGAGCGAAATATTTTCATCTTTGATTTTGGTGGTGGTACATTTGACGTGTCTCTGCTCACAATCAAGGGTGATGTCTTCGAAGTCAAGGCCACTGCTGGTGACACACACCTTGGAGGAGAGGACATGGATAACAGAGTGGTGAAGTACTTTGTACAGGAGTTCAATAGAAAGAACAAAGTTGACATAAATGGGAACCCGAAAGCCTTGAGGAGGTTGAGAACTGCTTGTGAGAGAGCAAAAAGGACGCTCTCATATGCTGTTTCCACCACCATTGAGGTAGATGCTTTATCAGGGAGCATTGACTTTTATTCATCACTCAGTCGTGCAAGATTTGAGGAACTGAACATGGACCTCTTTAAAAGGTGTATGGAGACAGTAGATAAGTGTCTTGTTGATTCTAAGATGGACAAGAGTGATGTAGATGATGTTGTTCTGGTTGGAGGTTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAAGACTACTTCAAGGGGAAAGAACTGTGCATGAGCATCAACCCTGATGAAGCTGTTGCTTATGGAGCAGCAATTCAGGCTGCTTTGCTAACTAAAAGCAACAAGTTTGTTCCCAACTTACTGTTATTAGATGTTACGCCGCTGTCACTTGGTGTAGCTATATGTGAAGATCTCATGAGTGTTGTGATTCCTAGGAACACCATCATTCCTGTTCAGAAAAAGGAAGGATTTGAAAGAAACAAAGATTTCAAATCATCTGTCTCAATAAATGTTTTCGAGGGTGAAAGAACAAGAGCAAGCGATAACAATTTTCTTGGTTCTTCTAAGCTTTATGGCAATCCTGATGCTCTTCGAGGCCATCCTTTTAGTGTAACTTTCAGTATAGATGTTGATGGTATTCTAACTGTAATTGCTGAGGAAGAAAGCAGTGGAAGTAAGAACTGGATTACTATAACCAACAACCAGGGAAGACTATCGACTCAACAAATTATGAGAATGATTGAAGATGCCGAGAAATATAAGGCTGAAGACGAGAAGTACCAAAAGAAAGTTGAAGCAGTTAATGCTTTGGATGACTTCGTTTACAAGATAAGGCATGCTATAGATGATGTTGATAACAGAAATAAGCTTCGTTTACGAGACAAAGCCAAGATCAACATGGCAATTGCAGAGGCCAGAAAATTGCTTGATGCTAGCCAGCAGACAGAAACAGAGGTGTTTGTGGATCATCTGAAAGCGGTGAAGAGCCTCATTGAACCCATTATGAAGATTAACTAG 1854 0.4202 MAEQKKEWAVGIDLGTTYSCVAVWLEEQCRVEIIHNDQGNRTTPSSVAFTENQRLIGDAAKNQAATNPTNTVFDVKRLIGRRFSDPIIRDDLKLWPFKVIADSDDKPMIAVLYKGQKKHISAEEISSMILTKMRETAEAYLESGVKNVVVTVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAALAYGLDKRAKCVVGERNIFIFDFGGGTFDVSLLTIKGDVFEVKATAGDTHLGGEDMDNRVVKYFVQEFNRKNKVDINGNPKALRRLRTACERAKRTLSYAVSTTIEVDALSGSIDFYSSLSRARFEELNMDLFKRCMETVDKCLVDSKMDKSDVDDVVLVGGSSRIPKVQQLLQDYFKGKELCMSINPDEAVAYGAAIQAALLTKSNKFVPNLLLLDVTPLSLGVAICEDLMSVVIPRNTIIPVQKKEGFERNKDFKSSVSINVFEGERTRASDNNFLGSSKLYGNPDALRGHPFSVTFSIDVDGILTVIAEEESSGSKNWITITNNQGRLSTQQIMRMIEDAEKYKAEDEKYQKKVEAVNALDDFVYKIRHAIDDVDNRNKLRLRDKAKINMAIAEARKLLDASQQTETEVFVDHLKAVKSLIEPIMKIN* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00170 617 Gene3D - 546 616 IPR029048 -
Phac8g00170 617 FunFam Heat shock protein 70 10 202 - -
Phac8g00170 617 Coils Coil 522 549 - -
Phac8g00170 617 FunFam Heat shock 70 kDa 238 321 - -
Phac8g00170 617 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 397 550 IPR029047 -
Phac8g00170 617 Gene3D - 194 369 - -
Phac8g00170 617 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Phac8g00170 617 Gene3D Actin; Chain A, domain 4 238 321 - -
Phac8g00170 617 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 394 545 IPR029047 -
Phac8g00170 617 FunFam heat shock 70 kDa protein-like 73 128 - -
Phac8g00170 617 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Phac8g00170 617 Gene3D - 73 128 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 60 68 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 212 222 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 38 50 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 8 21 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 148 168 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 372 392 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 340 356 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 398 417 - -
Phac8g00170 617 PRINTS 70kDa heat shock protein signature 478 494 - -
Phac8g00170 617 Pfam Hsp70 protein 9 614 IPR013126 GO:0005524|GO:0140662
Phac8g00170 617 ProSitePatterns Heat shock hsp70 proteins family signature 3. 343 357 IPR018181 -
Phac8g00170 617 Gene3D - 10 387 - -
Phac8g00170 617 PANTHER HEAT SHOCK PROTEIN 70KDA 9 575 IPR013126 GO:0005524|GO:0140662
Phac8g00170 617 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Phac8g00170 617 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Phac8g00170 617 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 614 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00170 Phac-Chr8 1091204 1093643 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00170 1 614 Calmodulin-binding Proteins AT3G12580 64.935 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00170 K03283 - gmx:102667578 798.89