Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00136 ATGAATTTCACTAGTAATTCAGCTTCACCAAACATGTTACCCAATTCTGTGTTGATACCCTCTTGTTCAATTTCTCGCTATCTTCAAGATGATAGAGAGGGTGGCAATTTCAATCTACCATTGGATTGCAATAACAATTCAGTTCCATCAAATTTGCTCACAAATTCCATGTCCATGTCCCCTTATGTGATGCCTCAATTTTCTCAAGACAGAGAGGCAAGCAATTTTATTCTACCATTGGATTTCAATAATAATTTAGCTTCATCGATTATGGTATCAAATCTCATGTCAAATCCCTTTTATTCAATGCCTCAGTCTAATGAAGAAGATAGACAGTGCCCTCTTGTCCTATACTTCATTATCATCAAGAAAAAAATAGAGAGGAGAAACACTTTCAATCTACCATTGGATTTCAAAGGTAATTCATCTTCAACAAATGTGTTATCAAACTCCATGTCAATACCCTCATATCCAATGCCTCAGTATTATCCAGAAAGCATACAGGAGGGGAAACTCCGATCCTTCTGGGAGAAGCAGTTGTTGGATATTCAAGCTGCTGAAGCATTTAAGAGCCAGCACAAGTTGCCGCTAGCTCGAATCAGAAGGATCATGAAAACAGACGCAGATGTGCAGATGGTGAGTGCTGAAACTCCCATGCTGATGTCAAAAGCATGTGAGATTTTTATCCAGGAGCTCACTTTTCGTGCATGGATGCGTGCTGAAGAGAGCAACAAGAGTACTGTGCAGCCATGTGATGTTGCTAAGGTTATTATGCAAAATGATGCCTTGCATTTCCTCACTGATATTGTCCCAGATAACCTCCAAAATTTCTGTGCTTATGGTGCTGCTGAGGAAGAACATGCTGCTGGAAACATTCCAGAAGGAAGACATCCAAGCCAAACTGCCCTGCCTGACACAGCTGGTTTTAGAAATCCTATGAATATGATGAACATGAGCAGAGGCTTGGGGGCAGGAAACCAAGTGATTCCTCAACCCAACAACAACAACATGATGCAGTCTCCCTTTGTTATGCCTTCAGATCAATTGCCTTACAATTTTCATCCCAATTGA 1071 0.4062 MNFTSNSASPNMLPNSVLIPSCSISRYLQDDREGGNFNLPLDCNNNSVPSNLLTNSMSMSPYVMPQFSQDREASNFILPLDFNNNLASSIMVSNLMSNPFYSMPQSNEEDRQCPLVLYFIIIKKKIERRNTFNLPLDFKGNSSSTNVLSNSMSIPSYPMPQYYPESIQEGKLRSFWEKQLLDIQAAEAFKSQHKLPLARIRRIMKTDADVQMVSAETPMLMSKACEIFIQELTFRAWMRAEESNKSTVQPCDVAKVIMQNDALHFLTDIVPDNLQNFCAYGAAEEEHAAGNIPEGRHPSQTALPDTAGFRNPMNMMNMSRGLGAGNQVIPQPNNNNMMQSPFVMPSDQLPYNFHPN* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00136 356 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 168 275 - -
Phac8g00136 356 SUPERFAMILY Histone-fold 172 266 IPR009072 GO:0046982
Phac8g00136 356 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 194 256 IPR003958 -
Phac8g00136 356 Gene3D Histone, subunit A 161 272 IPR009072 GO:0046982
Phac8g00136 356 FunFam Nuclear transcription factor Y subunit C 160 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00136 Phac-Chr8 889439 894997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00136 174 317 CCAAT-HAP5 Transcription Factor Family AT1G54830 42.759 7.23e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phac8g00136 CBFD_NFYB_HMF 1.1e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00136 - K08066 gsj:114370134 177.178