Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00125 ATGTCGTCCCTGTCGTCGACCACCATCACCACCACCATTGTAGCCATCACTCTCATCTTCTCTCTCCACCACACGACGTCGTTGCCGCCCCATGCACCACTCTCCACCTGCCACGTCACCTCCTTAAACTGCGGCACCATCACCAACCTTTCCTACCCTTTCACCGGCGGCGACCGCCCCTCCTTCTGTGGGCCCCCACAGTTCCATTTGAACTGCCAAAACGGTGTCGTCCCCGAGTTGAAAATCTCCTCAGTGAGCTACCGAGTCATTAGTATCGACTCGGTGGCTCAAACTCTCACCTTAGCAAGATTAGACCTTTGGAACGAGACATGCACCCATCTGTACGTGAACTCAACTTTTGATGACCCCATCTTCAGCTACGGTTCCGGGAACCAAAATCTGACCTTGTTTTATGAATGCAAACCCACTTCAGTGTTCACCAAAACACCAGAAAATTTGTTTCACTGTGATAGTAAAGGGCCTTTGAATGAGTCTTATGCTTTGGTTGGTTCTTTACCTTCGGATCCTGTTCTTGGGATTGTTGAATGCGTAGAACATATTGCAGTGCCAATTCTCAAAGAGCAGGCTGATAGGCTGGTTGAAAACCGGTCATTGCTTGGGGAGATTCTGATGAAGGGGTTTAATGTGAACTATTGGAATCCTTATGACAGTGTGTGTCTTGAGTGTGTTGGTTCTGGTGGCCTCTGTGGCTTTGATTCTGATAAGAACCAACCTATTTGTATTTGTGGGGATCAATTGTGTTCAACTCCAGGTATTCCAGCTTTTCTTTTGGTTCGGTGTTTGGTTCCACATCAAACACACATCTCAGATGTCATTTTCTACTTAAGTAAACGCAACAATGTAGGTTTAATAATAGGCGCTAGTGTAGGAGGAGTTGCAGTCCTTGTTGTCATTCTTGGATGTGTGTACTTTATGGTACAAAGAAGAAGAAAAATTTATAATAAATCAAGAAGTATGGAGCTCTTCATAGCTCCAACTTCAAGCGGGGACACTTTTGCATCCACCACCAATACGTCTCAGAGTCTATCTTCTTACCAATCTTCCAAGTCTGATCCAGTTGCCAGGAGTTACTACTTTGGTGTCCAGGTCTTCACCTATGAGGAACTGGAGGAAGCTACCAAAAACTTTGATGTTTCTAGAGAACTTGGTGAGGGAGGTTTTGGCACTGTTTACAAAGGTAAACTCAAAGATGGACGTATAGTTGCAGTGAAACGCCATTATGAAATAAACTCTAGGCGCATTACGCAGTTCGTGAATGAAGTTCAGATTCTAGCCCGCTTAAGGCACAAGAACCTTGTGACACTCTTTGGATGCACCTCTAAACATAGCAGAGAACTTCTCCTTGTTTATGAATTCATACCTAATGGAACATGCTACCAACTCACTTACAAAAGTGATGTTTACAGCTTTGGAGTGGTTTTGGTTGAGCTCATATCATCATTGCAAGCTGTGGACATAAACAGGAATCGCAGTGATGTGAACTTGGCAAACATGTTTGTCAAGAGAATTCAAAACCAGGAACTACATGAGTTGGTTGATCCTTGTCTTGGGTTTGAGAAGGATGATGCTATAAGGAGGATGGTAACAGCAGTGGCAGAATTGGCCTTCAGGTGTTTGCAACAGGAAAGAGATATGAGACCATCCATGAATGAGGTGGTGGAGATCTTAAGAGGAATCAAGAGAGATGGGGTTGGTGCAGGGGAAGAGACAGAGATATTGGATATTAGGACTGATGAAGTTATACTTTTGAAGAAGGCTCATTCCCCGGTTTCACCAGATTCAGTTGTTGACAATTGGGTTAGTGGCTCCTCTGTATCTAACTCCTCATAG 1851 0.4441 MSSLSSTTITTTIVAITLIFSLHHTTSLPPHAPLSTCHVTSLNCGTITNLSYPFTGGDRPSFCGPPQFHLNCQNGVVPELKISSVSYRVISIDSVAQTLTLARLDLWNETCTHLYVNSTFDDPIFSYGSGNQNLTLFYECKPTSVFTKTPENLFHCDSKGPLNESYALVGSLPSDPVLGIVECVEHIAVPILKEQADRLVENRSLLGEILMKGFNVNYWNPYDSVCLECVGSGGLCGFDSDKNQPICICGDQLCSTPGIPAFLLVRCLVPHQTHISDVIFYLSKRNNVGLIIGASVGGVAVLVVILGCVYFMVQRRRKIYNKSRSMELFIAPTSSGDTFASTTNTSQSLSSYQSSKSDPVARSYYFGVQVFTYEELEEATKNFDVSRELGEGGFGTVYKGKLKDGRIVAVKRHYEINSRRITQFVNEVQILARLRHKNLVTLFGCTSKHSRELLLVYEFIPNGTCYQLTYKSDVYSFGVVLVELISSLQAVDINRNRSDVNLANMFVKRIQNQELHELVDPCLGFEKDDAIRRMVTAVAELAFRCLQQERDMRPSMNEVVEILRGIKRDGVGAGEETEILDIRTDEVILLKKAHSPVSPDSVVDNWVSGSSVSNSS* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00125 616 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 464 IPR044652 GO:0004672
Phac8g00125 616 Gene3D Transferase(Phosphotransferase) domain 1 456 579 - -
Phac8g00125 616 Pfam Wall-associated receptor kinase C-terminal 179 252 IPR032872 -
Phac8g00125 616 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Phac8g00125 616 CDD TM_EGFR-like 285 322 - -
Phac8g00125 616 SUPERFAMILY Protein kinase-like (PK-like) 359 566 IPR011009 -
Phac8g00125 616 Pfam Protein tyrosine and serine/threonine kinase 467 563 IPR001245 GO:0004672|GO:0006468
Phac8g00125 616 ProSiteProfiles Protein kinase domain profile. 383 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00125 616 Gene3D Phosphorylase Kinase; domain 1 354 455 - -
Phac8g00125 616 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 359 459 - -
Phac8g00125 616 Pfam Protein kinase domain 384 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00125 616 Pfam Wall-associated receptor kinase galacturonan-binding 41 102 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00125 Phac-Chr8 832787 836201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00125 465 616 Receptor kinase-like Gene Family AT1G25390 46.951 1.78e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac8g00125 PK_Tyr_Ser-Thr 4.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00125 - - gmx:100780940 649.047