Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00117 ATGGCTGAAGTTGAATGCCTTGCAAAATCCACTACCCTAAAGCTCTTTGGCATCAACATTAACAAGTCCCCAGAAAATCAAACGCATCAGGAAGCAGCTTCCGATTCTGAGTCTTTCATGGCAAGAAAATACGAGTGTCAGTACTGCTTCAGAGAATTCGCAAATTCACAAGCACTTGGGGGGCACCAAAACGCGCACAAGAAAGAGAGACAGCTCTTGAAACGCGCTCAAATGCAAGCCGCTCGCGGCTTTGTCGCTTCACACGTTCACAACACGATCATGTCAACCTTCTCACCACAATCTCAGCCACCTTTACCGTGGCTATGCACACCACATGCATGGTCAAGTGACTCAGGAGTCGCTTTTGTGACTCCTGGAAGACGGGTCTATGCCACAGCCGGTGCCTCCGTCACTGATGGCCGTGGCCACCGCAATACTCCGCCAGAGATCGGTGGCTTCAACAGCGGCAATGGCAGAGGGAACGGTGGTGGTAATGGTGGTTTGGATTTGCATCTTAGCCTATGA 525 0.5086 MAEVECLAKSTTLKLFGININKSPENQTHQEAASDSESFMARKYECQYCFREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHVHNTIMSTFSPQSQPPLPWLCTPHAWSSDSGVAFVTPGRRVYATAGASVTDGRGHRNTPPEIGGFNSGNGRGNGGGNGGLDLHLSL* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00117 174 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Phac8g00117 174 SUPERFAMILY beta-beta-alpha zinc fingers 42 71 IPR036236 -
Phac8g00117 174 Gene3D Classic Zinc Finger 21 97 - -
Phac8g00117 174 PANTHER ZINC FINGER PROTEIN 5 9 174 IPR044299 GO:0010090
Phac8g00117 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
Phac8g00117 174 MobiDBLite consensus disorder prediction 137 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00117 Phac-Chr8 790302 791394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00117 9 174 C2H2 Transcription Factor Family AT1G67030 41.146 2.94e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac8g00117 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00117 - - gmx:100527555 227.254