Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00095 ATGCGGATGAGCTGCAATGGGTGTCGAGTTCTGAGAAAAGGGTGCAGTGAGAATTGCAGCATCAGACCCTGTTTACAGTGGATCAAAAGCCCAGAATCTCAAGCCAATGCTACTGTGTTTCTCGCCAAGTTCTATGGCCGTGCTGGCCTCATGAATCTCGTTAACGCAGGCCCCGAACATCTTCGTCCAGCGATCTTTCGTTCGTTGTTGTACGAGGCATGCGGTCGGATAGTGAACCCGATTTACGGTTCAGTTGGGTTGTTGTGGTCGGGGAGCTGGCAGCTGTGTCAAGCCGCAGTTGAAAACGTCTTGAGAGGCGCGCCGATCACGCCGATCACGTCTGAAGCGGCGGCGAGCGGGCGGGGCCCGCCGCTCAAGGCGTACGACATACGCCACGTGTCGAAAGATGAGAACTCCGCCGCGTCGAACGAAACTCAGCACCAACGAGTCAAGACTCGGTCTCGCGTCAGGCGTCCCCTCGCCAACGCCAAGCCCAAATCCACCTCCAACGAAAACAACGGTAACAAGGGAACCGAATTGGGTCTTTCTGAACCGGGTTTGATGACATGCGAGTGGACCGAAGAGGTGTTGAATCGATCTGGCAGTCACGATTCGTCGCTGAGCCACCAGTCTGAAGCGGCGAATGCGGTGGAGAGCGAGAGCATGGTGTCGGTGGAGACGGCGGAGACTTCGATCCTCTTCCGAGGTGAACCGGATTCGAACCCGAAGCTCGTGCGACGAACCGATGATGTTGGTTTGGAGCTTACGCTGGGGTTCGAACCGGTTTCACGTGCGCAGCACGTGGTTCCGGTGAAGAAGAGAAGGATCGAGTTGAAGGAATTTAATGGTTCGGCTGAGAGTGAGTCGTGCAAGATGGAGCTGGGGCTTGAATGTTCGGCTTGA 903 0.5604 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVENVLRGAPITPITSEAAASGRGPPLKAYDIRHVSKDENSAASNETQHQRVKTRSRVRRPLANAKPKSTSNENNGNKGTELGLSEPGLMTCEWTEEVLNRSGSHDSSLSHQSEAANAVESESMVSVETAETSILFRGEPDSNPKLVRRTDDVGLELTLGFEPVSRAQHVVPVKKRRIELKEFNGSAESESCKMELGLECSA* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00095 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 257 - -
Phac8g00095 300 MobiDBLite consensus disorder prediction 135 185 - -
Phac8g00095 300 MobiDBLite consensus disorder prediction 163 179 - -
Phac8g00095 300 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Phac8g00095 300 PIRSF AS2 1 300 IPR017414 -
Phac8g00095 300 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00095 Phac-Chr8 623479 625377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00095 1 296 AS2 family AT3G02550 56.667 1.35e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g00095 LOB 2.4e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00095 8 623479 625377 Phac8g00095 8 623479 625377 ECH