Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00034 ATGTCCTCTGCTTTCAACACACCCAGATTCGTCCTCAACAAGGTTCTCGCCAAATCTCAACACGAAGGGGACGGAGCTGTTGTCAGAAGAGGCATTGGAAGGAGCGACTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCCGCAGGATTTCCCGATCATCCACACAGAGGTTTTGAAACTGTCACCTACATGCTAGAGGGAGGTATTACTCACCAAGATTTTGCTGGGCACAAGGGTACAATCAGAGCTGGTGATGTTCAGTGGATGACTGCAGGTAGGGGAATAATTCACTCAGAAATGCCCGCAGAAGCAAACAACAAGGGACTGCAATTATGGATCAATTTATCATCCAGGGACAAAATGATCGAGCCCAAGTACCAAGAACTTCCAAGGGAGAACATTCCAACAGCAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGAGAAGCAATGGGAGTGCAATCCCCTGTGTACACACGAACTCCAACCATGTTCCTTGTGTTCTCCATGATGCCAGGAAGTGAGTGGCATCAGAGCATTCCAGAGCCGTGGAATTGCTTTGTTTATGTGATTGAAGGAGAAGGGGTTTTCGGGTCTCCAAGTTCTTCTCCATCTATGGCACATCATGTCCTTGTTCTGAGTCTAGGTGATGGCCTTAGCGTCTGGAACAACTCTTCAAAGCCTCTGAGGTTTGTTGTGGTTGGAGGACAGCCACTGAACGAGCCAGTGGCTCAGTATGGGCCTTTTGTGATGAACACACAGTCTGAGATTGAGAAAACCATTGAAGACTACCAACAAGGGAGGAATGGGTTTGAGATGAGGAACTATTGGAGGTCTCAATAG 867 0.4752 MSSAFNTPRFVLNKVLAKSQHEGDGAVVRRGIGRSDLKNLDPFLMLDHFSVSPPAGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRAGDVQWMTAGRGIIHSEMPAEANNKGLQLWINLSSRDKMIEPKYQELPRENIPTAEKDGVEVRVIAGEAMGVQSPVYTRTPTMFLVFSMMPGSEWHQSIPEPWNCFVYVIEGEGVFGSPSSSPSMAHHVLVLSLGDGLSVWNNSSKPLRFVVVGGQPLNEPVAQYGPFVMNTQSEIEKTIEDYQQGRNGFEMRNYWRSQ* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00034 288 CDD cupin_pirin_N 26 122 - -
Phac8g00034 288 Gene3D Jelly Rolls 142 247 IPR014710 -
Phac8g00034 288 CDD cupin_pirin_C 170 246 - -
Phac8g00034 288 Pfam Pirin 29 120 IPR003829 -
Phac8g00034 288 SUPERFAMILY RmlC-like cupins 9 286 IPR011051 -
Phac8g00034 288 PIRSF Pirin 7 286 IPR012093 -
Phac8g00034 288 FunFam pirin 22 155 - -
Phac8g00034 288 PANTHER PIRIN-RELATED 5 287 IPR012093 -
Phac8g00034 288 Pfam Pirin C-terminal cupin domain 174 278 IPR008778 -
Phac8g00034 288 Gene3D Jelly Rolls 22 274 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00034 Phac-Chr8 285258 287560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00034 6 281 Calmodulin-binding Proteins AT3G59220 64.388 3.94e-132 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00034 K06911 - gmx:100775597 523.857