Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00026 ATGGGTTGCTTCTCCTGTTTCGCTCCCACTTCCACTTCCAAGGAGGATCACAACCACCGTCACCACCACCACCGACAACCCAACCCCAATCCCAACCTCAATCCCAATCCATCTCTCCCTTCTCAGATTTCCAAATTGCCCTCTGGAGCAGACAAGCTACGGTCCAGAAGTAATGGAGGTTCCAAAAGGGAATTGGCTCCTCCCAACAACAAGGAAGGACACGGAGCCGCCGGCCAAATCGCTGCTCAAACTTTTACTTTCCGTGAACTTGCAACTGCAACCAAAAACTTTAGGCCGGACTCCTTTGTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAGGGCAGGCTTGAAACCACTGGTCAGATTGTTGCAGTCAAACAGTTAGACAAAAATGGTCTACAGGGTAATCGGGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTGCATCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGGGAACAACGCCTCCTTGTTTATGAATTTATGGCTTTGGGATCATTGGAAGATCACCTTCATGATCTTCCCCCTGATAAGGAACCACTAGATTGGAACACTAGAATGAAAATAGCTGCCGGTGCAGCAAAAGGATTAGAATACTTGCATGACAAGGCAAATCCTCCTGTCATTTATAGAGACTTCAAGTCGTCTAACATATTACTTGATGAAGGATACCACCCTAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCTACTCGAGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAGCTGACAGTGAAGTCTGATGTATACAGCTTTGGGGTTGTCTTCTTAGAGCTTATTACTGGCCGCAAAGCAATTGACAGCACCCAGCCCCATGGAGAACAGAATCTTGTCACATGGGCACGTCCACTTTTTAACGACCGCAGGAAGTTTTCAAAGTTGGCTGATCCTAGGCTTGAGGGACGGTTTCCCATGCGGGGTCTTTACCAGGCTCTAGCTGTGGCATCAATGTGCATTCAAGAATCTGCTGCCACACGCCCTCTGATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGGATACGACCCCAACAATGCTGGGCATGGTTATAAGGGTTCTAGCGATGATAAAAGGAACAGAGATGATAAAGGTGGAAAAATACTGAAAAATGATGAAGCTGGGGGATCTGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCAAGAATGTTAAACAGAGATCTAGAAAGAGAACGTGCTGTGGCTGAAGCCAAGCTATGGGGAGAGAACTTGAGACAAAAAAGACAACAAAGTTTGCAGGAGGGCACTTATGGTTCTAAGTAG 1419 0.4736 MGCFSCFAPTSTSKEDHNHRHHHHRQPNPNPNLNPNPSLPSQISKLPSGADKLRSRSNGGSKRELAPPNNKEGHGAAGQIAAQTFTFRELATATKNFRPDSFVGEGGFGRVYKGRLETTGQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGEQRLLVYEFMALGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQGYDPNNAGHGYKGSSDDKRNRDDKGGKILKNDEAGGSGRRWDLEGSEKDDSPRETARMLNRDLERERAVAEAKLWGENLRQKRQQSLQEGTYGSK* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00026 472 Pfam Protein kinase domain 101 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00026 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Phac8g00026 472 ProSitePatterns Protein kinases ATP-binding region signature. 103 126 IPR017441 GO:0005524
Phac8g00026 472 FunFam Serine/threonine-protein kinase PBS1 174 388 - -
Phac8g00026 472 MobiDBLite consensus disorder prediction 389 440 - -
Phac8g00026 472 ProSiteProfiles Protein kinase domain profile. 97 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00026 472 PANTHER OS07G0668900 PROTEIN 3 383 - -
Phac8g00026 472 MobiDBLite consensus disorder prediction 1 76 - -
Phac8g00026 472 Gene3D Transferase(Phosphotransferase) domain 1 174 387 - -
Phac8g00026 472 Gene3D Phosphorylase Kinase; domain 1 81 173 - -
Phac8g00026 472 FunFam Serine/threonine-protein kinase PBS1 70 173 - -
Phac8g00026 472 MobiDBLite consensus disorder prediction 381 440 - -
Phac8g00026 472 SUPERFAMILY Protein kinase-like (PK-like) 83 369 IPR011009 -
Phac8g00026 472 Coils Coil 430 450 - -
Phac8g00026 472 CDD STKc_IRAK 103 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00026 Phac-Chr8 254648 259115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00026 1 453 Glycoside Hydrolase AT3G07070 56.987 3.24e-170 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phac8g00026 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00026 K13430 - gmx:100305422 796.193