Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00012 ATGGAAAAACTGAATTTTGTGAAGAATGGGGAGCTCAGATTGCCTCCGGGGTTCCGTTTCCACCCAACTGACGAGGAATTGGTTGTGCAATACTTAAGGCGGAAGGTCTTCTCCTTCCCTTTGCCAGCCTCCGTCATTCCTGAGGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTAGAGAAAGAAAGGTACTTTTTCAGCACCAAAGAGCCCAAATATCCTAACGGCAACCGCTCCAACAGAGCCACCAATTCAGGTTATTGGAAGGCCACTGGGTTGGACAAACAAATTCTAACTTCTAAAGGGAACCAAGTTGTGGGGATGAAGAAGACACTTGTTTTCTACAGAGGAAAGCCACCTCATGGATCTAGAACTGACTGGATCATGCATGAATATCGCCTCCTTAACGCACCCACTTCCTCTCTGTCTCAGAGCCCTGTGGTTGAAGTTCCCATGGAAAACTGGGTTCTATGTCGCATATTTTTGAAGAGGAGAAGTGGTAGAAATGGGGAGGAGAAGGAGATGGGGAGTTTGAGAGGGAGAGTGGATAACCGGAAGGTGAGGAAATTGAAGATGGTTTTTTATGACTTTTTGGCGCAGAACAAGACTTATTCCTCATCTTCTGCCGCCAGTGGTATTACCCATGAATCCGATGAGCATGAAGAGAGTAGTAGCTCCAATACCTTCCCTTATTTTAGAAGAAAACCTTGA 723 0.4578 MEKLNFVKNGELRLPPGFRFHPTDEELVVQYLRRKVFSFPLPASVIPEVDVCKSDPWDLPGDLEKERYFFSTKEPKYPNGNRSNRATNSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLLNAPTSSLSQSPVVEVPMENWVLCRIFLKRRSGRNGEEKEMGSLRGRVDNRKVRKLKMVFYDFLAQNKTYSSSSAASGITHESDEHEESSSSNTFPYFRRKP* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00012 240 MobiDBLite consensus disorder prediction 209 240 - -
Phac8g00012 240 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Phac8g00012 240 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 210 - -
Phac8g00012 240 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Phac8g00012 240 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Phac8g00012 240 SUPERFAMILY NAC domain 10 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00012 Phac-Chr8 202057 209545 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00012 1 233 NAC Transcription Factor Family AT5G13180 58.140 3.08e-98 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac8g00012 NAM 6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00012 - - var:108321729 426.787