Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04355 ATGGAAACAGCCCTCACTTGCTTCTTCTGTGCCAGAGTCCCACCCACACCCAAATTGGGGCATGCTGCAACTGCAACTGCAACTTCAACTCACCTCTTCCCTTTTTTCAATGCCTCCACCCACCTCCGTTCTTCCTTTCGACACTATTGCCTTATTCCAAACGCTACTAACACCACCCAACCCAATGTTTCCACCAACTCCAAAACCCGAAGAAGGAGAAGAAGAAGTTCCCATACTCAGTTGGTGGTGGAGGAGGCTGCTTCTGTCCATCACAACGGAGACCCAATTGGTAAGAAGGATCTCGGGAAGTGTGTCATGAGATGGATTCGCGATAGCATGAGGGCCATGGCGTCTGATTTAGCTGCGGCGGAGATTCTGGGAGAGATGGAGTTGTGGGAGCTCATGGGACCGGGTCTCACTTTTATTATGCAGGCACAACCTTATCTCAATGCTGTTCCTATGCCCATTGGCCTTGAAGGTGTTTGCTTGAAGGCCTGCACGCACTATCCCACTCTGTTCGACCATTTTCAGAGGGAGCTTCGTGCTGTTCTCCAAGACCTGCAGAACGACAACTCCATTCAGGACTGGCGGGACACCAAGTCCTGGAAACTTCTTAAGCAGCTCGCCAATTCAGCTCAGCATAGGGCAGTTGTGAGAAAGATAGCACAACCCAAGAGTGTCCAAGGCGTTTTAGGAATGGACTTGGAAAAGGTCAAAGCAATACAGCACAGGATTGATGAATTCACCAATCACATGTCAGAACTACTCCGTGTGGAAAGGGATGCTGAATTGGAGTTTACTCAGGAGGAATTAGATGCCGTTCCTAAACCAGATGATGCTTCTGATTCTTCAAAACCTATTGATTTCTTGGTTAGTCATAGCCAGCCTGAACAAGAACTCTGCGATACCATTTGTAATTTAAATGCCATCAGTACCTCTACAGGACTGGGGGGAATGCATTTGGTATTATTCAAGGTTGAAGGGAACCACCGGTTACCACCTACTGCTCTTTCACCTGGAGACATGGTTTGTGTAAGAACGTATGACAGCAGGGGTGCAATTACAACTTCTTGCATACAAGGATTTGTAAACAGTTTTGGAGATGATGGCTATAGTATTACAATTGCTTTAGAGTCACGCCATGGTGATCCTACATTCTCTAAACTATTTGGGAAGAATGTGCGCATTGACCGTATTCAAGGACTGGCTGATACACTGACCTATGAGCGCAACTGTGAGGCTCTAATGCTGCTTCAGAAGAATGGTTTGCGTAAGAAGAATCCTTCAATTTCTGTTGTTGCTACTCTGTTTGGAGACGGGGAAGATGTTGCATGGCTAGAGAAGAATCATTTCGCTGACTGGGCAGAAGAAAAATCTGATGCAATTTTAGGAAGTGAAAGTTTTGACGATACTCAACGGAGAGCAATTGCACTGGGTTTGAATAAAAAAAGGCCTGTATTGGTTGTCCAAGGCCCTCCTGGTACAGGCAAGACTGGTTTGCTCAAGCATCTTATAGCATGTGCTGTTCAGCAAGGTGAACGGGTTCTTGTTACAGCACCTACTAATGCAGCTGTAGATAACATGGTTGAAAAGCTATCAAATGTCAGATTAAATGTTGTTCGGGTTGGAAATCCAGCTCGCATATCAAAAACAGTGGGATCAAAGTCTTTAGAAGAAATTGTAAATGCTAAGCTTGCAAGTTTTCGAGAAGAGTATGAGAGGAAGAAGTCAGATCTAAGAAAAGATCTAAGACATTGTTTAAGGGATGATTCACTAGCTGCGGGCATACGCCAACTTCTTAAGCAGCTGGGAAGGTCATTGAAGAAAAAGGAAAAGCAAACAGTAAATGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGACCCTTTAATTCGAAGGCTAGATACTTTTGACCTGGTAGTCATAGATGAAGCTGGGCAGGCAATTGAACCCTCTTGCTGGATTCCTATATTGCAAGGAAAGCGGTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTGGAAGGTGGTCTAAGAATATCTCTATTGGAAAGAGCTGCAACTTTGCATGAAGGGATTCTCACCACTAGGTTAACTACACAATACCGTATGAATGATGCTATTTCTAGTTGGGCTTCAAAGGAGATGTACGGAGGATTGTTGAAGTCCTCTGAGACTGTATTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTTCCTGGATAACACAATGCCCACTACTATTGTTAGATACTAGAATGCCATATGGAAGTCTGTCAGTTGGTTGCGAAGAGCATCTAGACCCAGCTGGAACAGGCTCACTTTATAATGAAGGAGAAGCTGAGATAGTTTTGCAGCATGTCTTTTCCTTAATTTACGCTGGTGTTAGCCCAGCTGCTATTGCAGTGCAATCCCCCTATGTTGCTCAAGTACAACTTCTGAGGGACAGGCTTGATGAATTTCCAGAAGCTGCCGGTATAGAGGTTGCAACCATTGACAGTTTTCAAGGTCGGGAAGCTGATGCAGTAATTTTATCGATGGTTCGATCAAACACATTGGGAGCTGTTGGATTCCTGGGGGATAGCAGAAGAATCAACGTTGCCATCACAAGAGCACGCAAACATTTAGCTTTGGTCTGCGACAGCTCCACTATATGCCACAATACCTTCTTAGCAAGACTTCTTCGTCATATTAGACACTTTGGTAGGGTGAAGCATGCAGAGCCAGGTAGTTTTGGGGGATACGGACTTGGGATGAATCCAATATTACCTTCCATTAATTAG 2829 0.4472 METALTCFFCARVPPTPKLGHAATATATSTHLFPFFNASTHLRSSFRHYCLIPNATNTTQPNVSTNSKTRRRRRRSSHTQLVVEEAASVHHNGDPIGKKDLGKCVMRWIRDSMRAMASDLAAAEILGEMELWELMGPGLTFIMQAQPYLNAVPMPIGLEGVCLKACTHYPTLFDHFQRELRAVLQDLQNDNSIQDWRDTKSWKLLKQLANSAQHRAVVRKIAQPKSVQGVLGMDLEKVKAIQHRIDEFTNHMSELLRVERDAELEFTQEELDAVPKPDDASDSSKPIDFLVSHSQPEQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTALSPGDMVCVRTYDSRGAITTSCIQGFVNSFGDDGYSITIALESRHGDPTFSKLFGKNVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSISVVATLFGDGEDVAWLEKNHFADWAEEKSDAILGSESFDDTQRRAIALGLNKKRPVLVVQGPPGTGKTGLLKHLIACAVQQGERVLVTAPTNAAVDNMVEKLSNVRLNVVRVGNPARISKTVGSKSLEEIVNAKLASFREEYERKKSDLRKDLRHCLRDDSLAAGIRQLLKQLGRSLKKKEKQTVNEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLRISLLERAATLHEGILTTRLTTQYRMNDAISSWASKEMYGGLLKSSETVFSHLLVDSPFVKPSWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSLYNEGEAEIVLQHVFSLIYAGVSPAAIAVQSPYVAQVQLLRDRLDEFPEAAGIEVATIDSFQGREADAVILSMVRSNTLGAVGFLGDSRRINVAITRARKHLALVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGYGLGMNPILPSIN* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04355 942 Gene3D - 716 924 IPR027417 -
Phac7g04355 942 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 117 925 - -
Phac7g04355 942 MobiDBLite consensus disorder prediction 57 80 - -
Phac7g04355 942 Coils Coil 569 589 - -
Phac7g04355 942 CDD DEXXQc_SMUBP2 467 717 - -
Phac7g04355 942 Gene3D - 253 700 IPR027417 -
Phac7g04355 942 FunFam DNA-binding protein SMUBP-2 isoform X2 271 402 - -
Phac7g04355 942 CDD SF1_C_Upf1 718 914 IPR047187 -
Phac7g04355 942 SMART ultradead3 464 716 IPR014001 -
Phac7g04355 942 Pfam AAA domain 468 684 IPR041677 GO:0004386
Phac7g04355 942 Pfam AAA domain 694 897 IPR041679 -
Phac7g04355 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 904 IPR027417 -
Phac7g04355 942 Gene3D - 271 402 - -
Phac7g04355 942 FunFam DNA helicase A 716 924 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04355 Phac-Chr7 42505367 42515827 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04355 462 657 Core DNA Replication Machinery Family AT1G08840 26.768 5.26e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04355 - - gmx:100799347 1627.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g04355 7 42505367 42515827 Phac7g04355 7 42505367 42515827 ECH