Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04348 ATGGCACCCCTCAAACTGCATCACTTCCTCCTTCTCATATTCATCTTCTTCTTCTTGCTCCCTTCTTCCCACGCCCAAACGCCACGTCAGGAGAACAACACGGGCTTCACGTGCACGGGCACCCGCACCTGCGCCGCCTACGCCTTCTACCGCGCCTCCGCTCCCGACTTCCTGGACCTGGCCGCCGTGGGCGACCTCTTCGAGGTGAGCCGCCTCATGATAGCCACGCCGAGCAACATCTCCTCTGCGTCCTCCGCCCTGGTCCAAGACCAGCCTCTCTTTGTCCCCTTGAGCTGCTCCTGCAACTCCGTGAATGCCACCTTCGGGTCCCTCTCCTACGCCAACATCTCCTACGTCATCCAACCCAACGACACCTTCTTCACCGTCTCCACCTTCAAGTTCAACAACCTCACCACCTACCCTTCCGTCGAAACCGTCAACCCCACCTTGGTCGCCACCAACCTCTCCATCGGCCAAGTCACCATCTTCCCTGTCTTCTGCAAATGCCCCGACACCAACAACACCAATTACATGATCTCGTACGTTGTGCAGCCCGAGGACAACATCTCCTCCATTGCCTCAACTTTTGGGGTTCAGGAACAAGCTATAATTGACGTCAACAACGACACACTCTATGATTATGACACCATTTTCATCCCGGTGGAGCAGCTTCCGTCTCTGTCGCAGCCTGCGGTGGCTCCAGCTGCGCCGCCTAGTGGGAATGGGAGTGAGAGTGGGAGTGGGAGGGATAGGACGGGGACTGTTAGAGGGTTGGGGATTGGGTTGGGGTTGGTGGGGTTGTTGTTGATATTGGTGAGTGGGGTGTGGTTGTGGAGAGAGTTTGTGATGAAGAAGAGGTTAGGAGTGAAGGATGAGGAAGATGAGGGAGGGAGGAAGAAGGTGTATTCGGGAGGGAAAGAGGGGCAGAAAGGTGGTTTGGATGTGAAACTGATGGCAACTGTGTCGGATTGTTTGGACAAGTATAGAGTTTTTGAGGTTGAGGAACTGGTGGAGGCCACTGATGGATTTGATAAGAGGTCCTTGATCGAGGGATCCGTTTACAGAGGGAAGATTGATGGGGAGCTCTTTGCCATCAAGAAGATGAAATGGAATGCCTATGAGGAACTCAAGATCTTGCAGAAGGTAAACCATGGGAATCTGGTGAAGTTGGAGGGATTCTGCATAGACCCAGAAGAAGCAAACTGCTATCTAGTCTATGAATATGTGGAGAATGGATCTCTATACTCGTGGTTGCATGGGGAGAAAAAGGAAAAGTTGAACTGGAAAACAAGGCTAAGAATAGCCATCGACATTGCCAATGGCCTCCAATACATCCACGAGCACACGAGGCCACGAGTTGTGCACAAAGACATCAAGAGCAGCAACATTCTCTTGGACTACAACAAGAGAGCAAAAATTGCAAATTTTGGGCTTGCAAAGTCTGGAATGAATGCCATCACCATGCACATTGTGGGAACACAGGGCTACATTGCCCCTGAATATCTGGCTGATGGTGTGGTCTCCACAAAGATGGATGTGTTCTCTTTTGGGGTTGTGTTACTTGAACTGATTTCTGGGAAGGAAGCCATCGATAAGGAGGGAAATCTGTTGTGGGCAAGTGCCATCAGAACATTTGAAGTGGAGAGTGAGCAAGAGAAGGTTAGAAGACTGAGGGAATGGTTGGATAAGGATATTTTAAGGGAGACATGCTCAATGGAAAGTTTGATGGGTGTTCTCACAGTTGCAATTGCTTGCTTGCAAAAAGAGCAGTCAAAGAGGCCCAGCATAATGGACATTGTCTATGCACTGTGTAAAAGTGAAGATTTGGGCTTTGACATCTCAGATGGTGGGATTGGCTCACCAAGGGTGGTGGCTAGGTAG 1881 0.5077 MAPLKLHHFLLLIFIFFFLLPSSHAQTPRQENNTGFTCTGTRTCAAYAFYRASAPDFLDLAAVGDLFEVSRLMIATPSNISSASSALVQDQPLFVPLSCSCNSVNATFGSLSYANISYVIQPNDTFFTVSTFKFNNLTTYPSVETVNPTLVATNLSIGQVTIFPVFCKCPDTNNTNYMISYVVQPEDNISSIASTFGVQEQAIIDVNNDTLYDYDTIFIPVEQLPSLSQPAVAPAAPPSGNGSESGSGRDRTGTVRGLGIGLGLVGLLLILVSGVWLWREFVMKKRLGVKDEEDEGGRKKVYSGGKEGQKGGLDVKLMATVSDCLDKYRVFEVEELVEATDGFDKRSLIEGSVYRGKIDGELFAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDPEEANCYLVYEYVENGSLYSWLHGEKKEKLNWKTRLRIAIDIANGLQYIHEHTRPRVVHKDIKSSNILLDYNKRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDKEGNLLWASAIRTFEVESEQEKVRRLREWLDKDILRETCSMESLMGVLTVAIACLQKEQSKRPSIMDIVYALCKSEDLGFDISDGGIGSPRVVAR* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04348 626 Pfam LysM domain 181 219 IPR018392 -
Phac7g04348 626 Gene3D Phosphorylase Kinase; domain 1 313 408 - -
Phac7g04348 626 Pfam Protein kinase domain 352 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04348 626 SMART serkin_6 343 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04348 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Phac7g04348 626 MobiDBLite consensus disorder prediction 229 251 - -
Phac7g04348 626 Gene3D LysM domain 178 220 IPR036779 -
Phac7g04348 626 SMART LysM_2 180 220 IPR018392 -
Phac7g04348 626 SMART LysM_2 117 164 IPR018392 -
Phac7g04348 626 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 605 - -
Phac7g04348 626 ProSiteProfiles LysM domain profile. 179 225 IPR018392 -
Phac7g04348 626 FunFam PTI1-like tyrosine-protein kinase 3 409 608 - -
Phac7g04348 626 SUPERFAMILY Protein kinase-like (PK-like) 327 603 IPR011009 -
Phac7g04348 626 Gene3D Transferase(Phosphotransferase) domain 1 409 611 - -
Phac7g04348 626 CDD LysM 179 219 IPR018392 -
Phac7g04348 626 ProSiteProfiles Protein kinase domain profile. 287 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04348 Phac-Chr7 42458072 42462116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04348 9 605 Receptor kinase-like Gene Family AT2G23770 33.014 3.44e-87 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phac7g04348 Pkinase 4.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04348 - - gmx:100802872 891.338