Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04335 ATGGAAGCGTCTCCGCCACCACGCACCATCCTCGGCAGGTACCAGCTCACGCGCTTCCTTGGCCGCGGCAACTTCGCCAAAGTGTACCAGGCACGCTCCCTCGTAGACGGCGCCACGCTGGCCGTCAAGGCCATCGACAAGTCCAAGACGGTCGACGCCGCCATGGAGCCCCGCATCGTGCGCGAGATCGACGCGATGCGCCGCCTCCAGAACCACCCAAACATCCTCAAAATCCACGAAGTCCTCGCCACAAAGACCAAAATCTACCTCGTCGTCGACTACGCCGGCGGCGGCGAGCTCTTCTCCAAGCTCTCCCTGCGCGGCCGCCTCCCGGAGCCCCTGGCGCGGCGCTACTTCTCCCAGCTCGTCTCTGCGCTCCTCTTCTGCCACCGCCACGGCATCGCGCACCGTGACCTCAAGCCGCAGAACCTCCTCCTAGACGCCGCCGGCGACCTTAAGGTTTCCGACTTCGGCCTCTCCGCGCTCCCGGAGCACCTCCGCGATAACCTCCTCCACACCGCCTGCGGCACGCCGGCCTTCACTGCGCCGGAGATCCTACGCCGCGTCGGCTACGACGGCTCCAAGGCCGACGCGTGGTCCTGCGGTGTCATTCTCTACAACCTTCTTGCCGGCCACCTCCCCTTCGACGACTCGAACATTCCGGCCATGTGCCGGCGAATCTCCCGCCGCGACTACCAATTCCCGGAGTGGATATCAAAATCCGCGCGCAGCCTCATCCACCAATTGCTGGACCCTAACCCTAAATCGCGAATTTCACTGGAAAGAGTTTTCGATTGCAGATGGTTGAGGAATAAGAAAGCGGTTTGGTGTAACGTGTTGGAGGAGAGTGTATTGGAGTCTGATATGTATAACAAGTGCTGCGACGGTTACAAATTGGGGATGAACGCATTTGACATAATATCGATGTCGTCGGGGTTGGACTTGCGAGGACTGTTCGAGACGACGTCGGAGAAGGGGAGGCGGAGGGAGAAGAGGTTCAGTTCGGAGAAGAGCGTGGGAACGGTGGAGGCGAAGGTTAAGGAGGTTGGGGAGAGGTTAGGGTTTAGGATTGAAGTTGGAAAGAACGGTGCAATTGGGTTGGGAAAGGGGAAGGTGGGTTTGGTGGTTGAGGTGTTTGAGATTGTGTCTGACTTGCTCCTTGTCTCTGTTAAAGTTGTTGATGGTGGCGTTGACTTTGACCTTCTTCACTGGGATGATTGGAGACTTGGCCTTCAAGATCTTGTTCTCTCATGGCATCCCTGTGAATGA 1269 0.5847 MEASPPPRTILGRYQLTRFLGRGNFAKVYQARSLVDGATLAVKAIDKSKTVDAAMEPRIVREIDAMRRLQNHPNILKIHEVLATKTKIYLVVDYAGGGELFSKLSLRGRLPEPLARRYFSQLVSALLFCHRHGIAHRDLKPQNLLLDAAGDLKVSDFGLSALPEHLRDNLLHTACGTPAFTAPEILRRVGYDGSKADAWSCGVILYNLLAGHLPFDDSNIPAMCRRISRRDYQFPEWISKSARSLIHQLLDPNPKSRISLERVFDCRWLRNKKAVWCNVLEESVLESDMYNKCCDGYKLGMNAFDIISMSSGLDLRGLFETTSEKGRRREKRFSSEKSVGTVEAKVKEVGERLGFRIEVGKNGAIGLGKGKVGLVVEVFEIVSDLLLVSVKVVDGGVDFDLLHWDDWRLGLQDLVLSWHPCE* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04335 422 FunFam Non-specific serine/threonine protein kinase 7 99 - -
Phac7g04335 422 FunFam Non-specific serine/threonine protein kinase 5 295 - -
Phac7g04335 422 Pfam NAF domain 301 358 IPR004041 GO:0007165
Phac7g04335 422 Gene3D Kinase associated domain 1, KA1 303 416 - -
Phac7g04335 422 CDD CIPK_C 302 412 - -
Phac7g04335 422 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Phac7g04335 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Phac7g04335 422 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Phac7g04335 422 SUPERFAMILY Protein kinase-like (PK-like) 10 277 IPR011009 -
Phac7g04335 422 ProSiteProfiles Protein kinase domain profile. 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04335 422 Pfam Protein kinase domain 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04335 422 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 361 - -
Phac7g04335 422 SMART serkin_6 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04335 422 Gene3D Transferase(Phosphotransferase) domain 1 7 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04335 Phac-Chr7 42420790 42422664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04335 3 419 Miscellaneous Gene Families AT3G23000 56.028 2.54e-159 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Phac7g04335 Pkinase 1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04335 K12761 - gmx:100305372 691.419