Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04323 ATGCCAGTGAGACAGATGAGGGAGAGCTCAGAACAACACCTTGTTATCAAGCCCCATTTGCAGAACCCCATGAATGGAGCCAAGAAGGTTTCTAGAGCTGTACAAAATGGCAAAGGTCCACCACCACCACCACTGCCACAAGAACCACACAACCAAACTTCACCTCATGCAAGGAACAAGGGGAGGAGAAGGAGCAGAGGTGGCAGAAAATGTGATCAAGGAGATGTTTTGATGAGACCTATTGTGACAAGTGGTGTTGGAAATGGAAGCACCATGTGTGGTGAAATAGAGAAGGGATACCCTACATCAAGCAAGTCTTTGAACTTTGCTCCTAGGCCTGGCTATGGACAAGTTGGTATAAAGTGCATTGTGAAGGCTAACCATTTCTTTGCAGAGTTACCGGACAAGGACCTGAACCAGTATGATGTCAGTATCACCCCTGAAGTCTCTTCCAAAGCTGTGAACAGGTCAATAATAGCAGAACTCGTGAGACTGTATAAAGAGTCTGACCTTGGGATGAGGCTTCCAGCATATGATGGCAGGAAAAGTCTGTACACTGCAGGTCCTCTTCCCTTTTCCTGGAGAGAGTTTAAGATAAAGGTTGTGGATGATGAAGCTGGAGTTAATGGCCCCAAAAGGGAAAGAGAATATAGAGTGGTGATCAAGTTTGTTGCTAGGGCGAATTTGCATCACTTGGGCCAGTTTCTGGCTGGTAAACGTGCTGATGCTCCACAAGAGGCACTCCAAATTCTTGACATTGTATTAAGAGAGCTTTCATCTAAGAGGTTCTGTCCAATTGGGAGATCCTTCTTTTCACCAGATATTAGAACACCCCAACGGCTTGGGGAAGGTTTGGAGTCTTGGTGTGGATTTTACCAAAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAATATTGATATGGCTTCTGCTGCGTTCATTGAACCTCTTCCAGTTGTGGAATATGTTGGCCAGCTATTAGGAAAAGATATCATATCAAGGCAATTGTCTGACGCGGATCGCATCAAAATTAAGAAAGCTCTTAGAGGAGTTAAAGTTGAAGTAACCCACAGAGGGAGTGTTCGAAGAAAGTACCGAGTTTCTGGTTTGACTTCTCAACCAACCAGAGAACTTGTGTTTCCTGTTGATGAGAACTCAACTATGAAGTCAGTAGTTGAATATTTCCAAGAGATGTATGGTTTCACAATTAAATATACTCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAAGCAAATTATTTACCTATGGAGGCCTGCAAAATTGTTGAAGGACAACGCTATACTAAAAGGTTGAATGAGAAGCAAATCACTGCTCTCCTGAAAGTTACTTGTCAAAGACCTCGTGATCGAGAAAATGATATTTTACGGACCATTCAGCACAATGCTTATGATCAAGACCCTTATGCAAAGGAATTTGGAATTAAAATAAGTGAGAAGTTAGCTTCGGTAGAGGCTCGAATTCTTCCTGCCCCGTGGCTTAAATATCATGAAAGTGGGAAGGAAAAGAATTGTTTGCCCCAAGTTGGTCAATGGAATATGATGAACAAGAAAATGATAAATGGGATGACTGTCAGCCGGTGGGCATGCATAAATTTTTCAAGAAGTGTACAAGACACTGTTGCTCTCACTTTTTGTACCGAACTAGCTCAAATGTGCCATGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCATCTACAATGCCAAACCTGAGCATGTGGAGAAAGCTTTGAAGCATGTTTACCATGTGTCAACAAACAAAACCAAAGGAAAGGAATTGGAGCTTTTATTAGCAGTATTGCCTGACAACAATGGTTCTCTCTATGGTGATCTAAAGCGTATTTGTGAAACTGACCTTGGTTTAATTTCTCAATGTTGTCTGACGAAGCATGTCTTCAAGATCACTAAGCAGTACCTGGCTAATGTGTCTTTGAAAATCAATGTCAAGATGGGAGGTAGAAACACTGTTTTGGTTGATGCTGTAAGTTGTAGAATACCACTGGTTAGTGACATACCAACTATAATATTTGGAGCAGATGTTACCCACCCTGAAAATGGAGAAGACTCCAGCCCTTCAATTGCAGCTGTAGTAGCATCTCAAGACTGGCCTGAAGTGACAAAATATGCCGGTTTAGTGTGTGCTCAGGCTCATAGGCAGGAACTTATACAAGACTTGTACAAAATGTGGCATGACCCTGTTCGTGGCTTAGTTAGTGGTGGCATGATCCGAGATTTGTTGATTTCCTTTAGAAAGGCAACAGGACAGAAGCCTCTAAGGATTATATTTTATAGGGATGGTGTAAGTGAAGGGCAATTTTACCAAGTTCTACTATACGAGTTGGATGCAATTCGGAAGGCATGTGCTTCTTTAGAACCAAACTATCAACCTCCGGTAACTTTCATAGTTGTACAAAAAAGACATCATACTCGGTTGTTTGCAAATAACCACAGGGACAGAAGCAGCACAGATAAGAGTGGAAATATATTGCCTGGGACTGTTGTGGATTCTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGCAGTCATGCTGGTATTCAGGGTACAAGTCGTCCTGCTCATTATCATGTTCTTTGGGATGAAAACAACTTTACAGCAGATGGAATCCAATCTTTGACAAACAATCTATGCTATACATATGCCAGGTGTACACGCTCAGTGTCTGTTGTTCCTCCTGCGTATTACGCACACTTGGCAGCTTTTCGGGCACGGTTCTACATGGAACCGGAAATGCAGGAAAATGGCTCCTCGGGGGGTGGTGGTGGTGGTGGTTCCAAGGCAACAAGAGCAGGTGGAGAGTGTGGTGTGGTGAAGCCATTGCCAGCCTTGAAAGAGAATGTGAAGAGAGTAATGTTTTACTGTTAG 2919 0.4272 MPVRQMRESSEQHLVIKPHLQNPMNGAKKVSRAVQNGKGPPPPPLPQEPHNQTSPHARNKGRRRSRGGRKCDQGDVLMRPIVTSGVGNGSTMCGEIEKGYPTSSKSLNFAPRPGYGQVGIKCIVKANHFFAELPDKDLNQYDVSITPEVSSKAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGPLPFSWREFKIKVVDDEAGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEYVGQLLGKDIISRQLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDTVALTFCTELAQMCHVSGMEFNPEPVIPIYNAKPEHVEKALKHVYHVSTNKTKGKELELLLAVLPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKMWHDPVRGLVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSSGGGGGGGSKATRAGGECGVVKPLPALKENVKRVMFYC* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04323 972 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 103 926 - -
Phac7g04323 972 MobiDBLite consensus disorder prediction 1 74 - -
Phac7g04323 972 ProSiteProfiles Piwi domain profile. 605 926 IPR003165 GO:0003676
Phac7g04323 972 Pfam N-terminal domain of argonaute 122 255 IPR032474 -
Phac7g04323 972 FunFam protein argonaute 10-like 674 972 - -
Phac7g04323 972 FunFam Protein argonaute-2 310 436 - -
Phac7g04323 972 SMART DUF1785_2 264 316 IPR014811 -
Phac7g04323 972 CDD Piwi_ago-like 475 925 IPR045246 -
Phac7g04323 972 FunFam Argonaute 10 495 668 - -
Phac7g04323 972 SUPERFAMILY Ribonuclease H-like 597 926 IPR012337 -
Phac7g04323 972 Pfam Argonaute linker 2 domain 457 503 IPR032472 -
Phac7g04323 972 Gene3D - 674 972 IPR036397 GO:0003676
Phac7g04323 972 SMART Piwi_a_2 605 926 IPR003165 GO:0003676
Phac7g04323 972 Pfam Argonaute linker 1 domain 265 314 IPR014811 -
Phac7g04323 972 Gene3D - 495 668 - -
Phac7g04323 972 CDD PAZ_argonaute_like 316 430 - -
Phac7g04323 972 Gene3D paz domain 310 435 - -
Phac7g04323 972 Pfam Mid domain of argonaute 514 591 IPR032473 -
Phac7g04323 972 Pfam PAZ domain 343 447 IPR003100 GO:0005515
Phac7g04323 972 ProSiteProfiles PAZ domain profile. 317 431 IPR003100 GO:0005515
Phac7g04323 972 SMART PAZ_2_a_3 321 453 IPR003100 GO:0005515
Phac7g04323 972 Pfam Piwi domain 606 925 IPR003165 GO:0003676
Phac7g04323 972 SUPERFAMILY PAZ domain 311 471 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04323 Phac-Chr7 42342130 42349707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04323 1 972 Eukaryotic Initiation Factors Gene Family AT5G43810 81.062 0.0 1639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04323 K11593 - gmx:100819073 1862.43