Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04310 ATGAGTTGTGTTAATGATGGTCCTGTGATTGTGAAGGAGGAGTTTCCTGGAGAAGGGTTTGTCGCTCCACAACCACTTGAGGGGCTTCATGAAAGTGGTCCTCCACCATTCCTCACAAAGACTTATGACATAGTTGATGATGTTTCCACCGATGAGATAGTTTCATGGAGCAGAGAAAACAACAGCTTCGTTGTGTGGGATCCTCAAGCTTTTTCCATCACTCTTCTCCCCAAATACTTCAAACACAACAACTTCTCCAGCTTTGTCAGACAGCTCAATACCTATGGGTTTAAAAAGGTGGATCCTGATAAATGGGAGTTTGCTAATGAAGGGTTTCTTAGAGGACAAAGACATCTATTGAAGATCATAAGGAGGAGGAGGAAAAGCACTCATCAACCTCAACCACCACAACAATCTCTGGATCATTGTGTTGAAGTATTAGATGGAGAAATCGATGGGTTGAGACGTGAGAAGCAAGTTCTGATGGTGGAGCTGGTGAAGCTTAGACAACAACAGCAGAACACAAAAGACCACCTTCAATCAATGGAAAATAGGCTAAAAAAGACTGAGCAGAAACAGCAACAGATGATGAAGTTCTTGGCAAGGGCAATGCAAAACCCCAACTTCTTGCAACAATTGGTTCAACAAAGGGAGTGGAGGAAAGAGCTGGAGGAAGCTTTTTCCAACAAGAGAAGAAGAGCTATTGATGAAGGATATAATGATGCTGAAGAATGTTCAGGTTTGGTTAAACTTGAACAGGAGGACTACACTGATATATCAGAGCTTGAGGTTTCTGACATAGAGCTTGCTATGAATATAGAAAGTGGAAGCCAAAAGAAGACTTGTGGTGAAGAGGAGAAAGGAGGTGAACTTGAAAGTAGAAATGGAGGCATTGAGGAAGTACTCTTGGAAGAACTTTTGAATGAGGGTGCTGAAGAAGATCTACTAGCATTGGAAAATGATGACAATGAAGATATAATTTTGTTGTCTCAGGAACTTGGTTATTTAGCATCTAAACCCTAA 1023 0.4135 MSCVNDGPVIVKEEFPGEGFVAPQPLEGLHESGPPPFLTKTYDIVDDVSTDEIVSWSRENNSFVVWDPQAFSITLLPKYFKHNNFSSFVRQLNTYGFKKVDPDKWEFANEGFLRGQRHLLKIIRRRRKSTHQPQPPQQSLDHCVEVLDGEIDGLRREKQVLMVELVKLRQQQQNTKDHLQSMENRLKKTEQKQQQMMKFLARAMQNPNFLQQLVQQREWRKELEEAFSNKRRRAIDEGYNDAEECSGLVKLEQEDYTDISELEVSDIELAMNIESGSQKKTCGEEEKGGELESRNGGIEEVLLEELLNEGAEEDLLALENDDNEDIILLSQELGYLASKP* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04310 340 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g04310 340 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g04310 340 PRINTS Heat shock factor (HSF) domain signature 37 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g04310 340 SUPERFAMILY "Winged helix" DNA-binding domain 32 126 IPR036390 -
Phac7g04310 340 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 23 239 IPR027725 -
Phac7g04310 340 Gene3D - 29 127 IPR036388 -
Phac7g04310 340 FunFam Heat shock transcription factor 1 30 127 - -
Phac7g04310 340 ProSitePatterns HSF-type DNA-binding domain signature. 76 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g04310 340 SMART hsfneu3 33 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Phac7g04310 340 Coils Coil 151 199 - -
Phac7g04310 340 Pfam HSF-type DNA-binding 37 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04310 Phac-Chr7 42320298 42322471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04310 23 338 HSF AT3G22830 56.145 4.71e-122 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Phac7g04310 HSF_DNA-bind 2e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04310 K09419 - gmx:100806789 413.69