Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04300 ATGGGGAGGACTGGCAAATGGCTTAGGAACTTGTTGACAGCGAAGAGAGACAGAGAAAAAGAGAAGGAAAAATGTGGTACCAAGTGTTTGTTAAATGGCACCACAGAGAATCCAACCACTCCTGCTTCTTCATCAACAACAACTACTACAACAACAACCACCCCCAAGGAAAAAAGAAGATGGAGTTTCAGAAGATCATCAGCTTCCAGGGAACTGAATCTTGAAGAATCTGGTGTCACTGCCTCAGTGACAGTGCAGACAACCAGAACAGATGTTGAGAATGATCAAAGGAAACATGAGGCTGATGTTGCTATGATCTGCTTGACTCCTGATTCCAATATATCATCAACAAGTATTCAAGAGACTGCAGCCATTCAAATTCAGTCAGTTTTTCGGTCCTACTTGGCAAGAAAGGCACTTTGTGCTCTTAGAGGAATAGTGAAGTTGCAGGCACTAGTGAGGGGTCACTTGGTGAGAAAACAGGCCAGGGAGACACTAAGATGCATGCAGGCTTTGGTCATAGCACAAGCCAGGGCTCGTGTTCAGAGGGCAAGGATCGTGTCAGAAGGAAAGGTTCACCAAAATCTTTCACCCTACAGAATATCCACAGAGGACAACTTCATGTATAATGAAATGAAAAGTGGTTTGGAATTGGAAGAGAATGCCAAGATGGTTGAGATGGCTGTTTGGGAATCCAAAGCTAACTCCAAAGGCAGAAACAACATGAATAGTGAACTTTCAGATCATAGATTTTCTGCATATTATTCATCAAATGGTTCATACTCAAAGGAGGAAAACTGCAATGCATCACCTGCACCATCAACACTGACAGACTTGAGTCCAAGAGCATACAGTGGTCATTTTGAGGAGTGTTCCTTCAGCACAGCACAAAGTAGTCCCTATTACTGCTCAGCAGTGTCAAGAGTGGACAACACAAAGCTACCTTTTGCCTTCCCTAAACCAGCCTACACAGAACCCATGTCCTATGACTACCCTTTGTTTCCAAACTACATGGCCAACACAGAATCTTCAAGGGCCAAATCCAGATCACAGAGTGCACCAAAGGCGAGGCCGGATTCCTTCGAGAGGCAGCCAAGCCGGCGAAGGGCTTCAATGGAAGGGAGAAATGTCCCAAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTTGGTGTCACTGCCCAAAACTACCAATATCCTTGGTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCTACAAGTACAGTGCTCACAAACTCTAATTACTACTGCACATGA 1287 0.4491 MGRTGKWLRNLLTAKRDREKEKEKCGTKCLLNGTTENPTTPASSSTTTTTTTTTPKEKRRWSFRRSSASRELNLEESGVTASVTVQTTRTDVENDQRKHEADVAMICLTPDSNISSTSIQETAAIQIQSVFRSYLARKALCALRGIVKLQALVRGHLVRKQARETLRCMQALVIAQARARVQRARIVSEGKVHQNLSPYRISTEDNFMYNEMKSGLELEENAKMVEMAVWESKANSKGRNNMNSELSDHRFSAYYSSNGSYSKEENCNASPAPSTLTDLSPRAYSGHFEECSFSTAQSSPYYCSAVSRVDNTKLPFAFPKPAYTEPMSYDYPLFPNYMANTESSRAKSRSQSAPKARPDSFERQPSRRRASMEGRNVPRPVRMQRSSSHVGVTAQNYQYPWSIKLDRSIVSECGSTSTVLTNSNYYCT* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04300 428 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Phac7g04300 428 Pfam IQ calmodulin-binding motif 144 163 IPR000048 GO:0005515
Phac7g04300 428 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Phac7g04300 428 MobiDBLite consensus disorder prediction 29 80 - -
Phac7g04300 428 MobiDBLite consensus disorder prediction 57 71 - -
Phac7g04300 428 PANTHER IQ-DOMAIN 5-RELATED 1 374 - -
Phac7g04300 428 MobiDBLite consensus disorder prediction 30 56 - -
Phac7g04300 428 Pfam Protein of unknown function (DUF4005) 315 375 IPR025064 -
Phac7g04300 428 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Phac7g04300 428 MobiDBLite consensus disorder prediction 342 357 - -
Phac7g04300 428 MobiDBLite consensus disorder prediction 342 389 - -
Phac7g04300 428 Gene3D - 119 172 - -
Phac7g04300 428 SMART iq_5 119 141 IPR000048 GO:0005515
Phac7g04300 428 SMART iq_5 142 163 IPR000048 GO:0005515
Phac7g04300 428 MobiDBLite consensus disorder prediction 360 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04300 Phac-Chr7 42265136 42268108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04300 1 425 IQD Protein Family AT4G14750 44.227 5.53e-92 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04300 - - pvu:PHAVU_007G277500g 766.148