Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04299 ATGGCAGAAACGAAAGAAGGTTCAGGTTCGGAGATGTCTCTGAAGGATCAGGGCAACGAGTTTTTCAAGTCAGGAAAGTATCTCAAAGCTGCTGCACTCTACACTCAAGCCATCAAGCAAGACCCTTCTAACCCTACTCTCTATAGTAATCGTGCTGCAGCATTGCTGCAATTGGATAAGCTTAATAAAGCTCTTGATGATGCTGAGATGACAATCAAATTAAAACCCCAATGGGAAAAGGGATATTTCAGGAAGGGAAGCATATTGGAAGCCATGAAACGATATGACGATGCTTTAGCTGCCTTTCAGATAGCATTGCAGTATAACTCGCAAAGTCAAGAAGTATCAAAAAAGATAAAGAGAATGAACCAACTGGTGAAAGATAGCAAGCGAGCTCAAGAAGTGGAGAATATGAGATCGAATGTTGACGTGGCTAAACATTTAGATACATTCAAATCTGAAATGGTGGAGAAGTATGGATCTGAAGAATGCTGGAAACATTTGTTCTCATTCGTTGTTGAGACTATAGAGACTGCTGTAAAATCATGGCTTGAAACATCTTCGGTGGATGCTAGAGTTTACTTTCTTCTGGATACGGAAAAGACACAGACTGATAAGTATGCCCCAGTTGTGAATATTGATAAGGCCTTTGAATCACCACATACGCACGCCAATTGCTTTTCATTTCTTAGGCAGTACGCAGAGGAGTCTTTCTCCAAAGCAGCCTGCTTGGTAACTCCCAAAAACATTATTGCTTATCCACAGGTCTGGAAGGGCCAAGGATCAAGAAAGTGGAAACATGCACACAGTGATGGTTTCTTTGTTCAATTTGAGTCACCCTCTCTGCGAAAGCTCTTTTTCATACCTAGTTCAAATGAAAAGGGACAGATATTGTGCAGGGATCCAGAGGGTTTGGACATTGGTGTTCATGAAGTTCTTCCCCGGTTATTCAAAGAAAAGATGCCCCAATCTTAG 975 0.4154 MAETKEGSGSEMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALAAFQIALQYNSQSQEVSKKIKRMNQLVKDSKRAQEVENMRSNVDVAKHLDTFKSEMVEKYGSEECWKHLFSFVVETIETAVKSWLETSSVDARVYFLLDTEKTQTDKYAPVVNIDKAFESPHTHANCFSFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAHSDGFFVQFESPSLRKLFFIPSSNEKGQILCRDPEGLDIGVHEVLPRLFKEKMPQS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04299 324 Gene3D Tetratricopeptide repeat domain 11 125 IPR011990 GO:0005515
Phac7g04299 324 FunFam serine/threonine-protein phosphatase 5 10 124 - -
Phac7g04299 324 SUPERFAMILY TPR-like 13 121 IPR011990 GO:0005515
Phac7g04299 324 Coils Coil 51 71 - -
Phac7g04299 324 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Phac7g04299 324 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Phac7g04299 324 SMART tpr_5 11 44 IPR019734 GO:0005515
Phac7g04299 324 SMART tpr_5 45 78 IPR019734 GO:0005515
Phac7g04299 324 SMART tpr_5 79 112 IPR019734 GO:0005515
Phac7g04299 324 PANTHER TPR REPEAT CONTAINING PROTEIN 8 319 - -
Phac7g04299 324 Pfam TPR repeat 18 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04299 Phac-Chr7 42258194 42263218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04299 7 154 U-box Gene Family AT3G07370 25.455 6.57e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04299 - - gmx:100790717 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g04299 7 42258194 42263218 Phac7g04299 7 42258194 42263218 ECH