Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04235 ATGGTTAGAGCTCCTTGCTGTGAAAAGATGGGGTTGAAGAAGGGTCCTTGGACCCAAGAGGAAGATCAAACCCTAATCTCATACATCCAAAAACATGGCCATGGAAACTGGCGTGCCCTTCCAAAGCTTGCAGGGCTATTGAGGTGTGGAAAGAGTTGCAGACTGAGGTGGATTAACTACTTGAAACCTGACATCAAAAGAGGAAATTTCTCAAGTGAAGAAGAAGACATTATCATCAAGATGCATGAGTTGCTGGGAAATAGGTGGTCAGCAATAGCAGCAAAACTACCAGGAAGAACAGACAATGAAATTAAAAATGTGTGGCACACTCACTTGAAGAAAAAGTTGCTGAATTCAGATACCAAAAGGGTTTCCAATCCAAAAATCAAACGATCTGATTCCAATTCCAGCACCCTAACTCAATCAGAACCCACATCATCATCACCATGCACAACTTCTTCCAGTGATTTTTCATCATTCAGTGACATGAACAACAACACCATGATCAAGAGTGAAGACACAGAGTCTGAGGAGATAACCATGCCTCCAATTGATGAAAGCTTTTGGTCAGAGGAAACAGTGATGCCATCAAATTCTTGGACAGTTTCAAATGATCACCACCAATACCAATTTGATTCAGTGGAAACCTTCCAACAACACAGTTTTGGCTATAATGGTTCAAACTTTGATGATGGAATGGATTTTTGGTATGACATATTCATCAGATCAGGAGAGTCAATAGAATTGCCAGATTTTTGA 759 0.4058 MVRAPCCEKMGLKKGPWTQEEDQTLISYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLKPDIKRGNFSSEEEDIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLLNSDTKRVSNPKIKRSDSNSSTLTQSEPTSSSPCTTSSSDFSSFSDMNNNTMIKSEDTESEEITMPPIDESFWSEETVMPSNSWTVSNDHHQYQFDSVETFQQHSFGYNGSNFDDGMDFWYDIFIRSGESIELPDF* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04235 252 CDD SANT 69 112 IPR001005 -
Phac7g04235 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Phac7g04235 252 CDD SANT 16 61 IPR001005 -
Phac7g04235 252 Gene3D - 13 66 - -
Phac7g04235 252 MobiDBLite consensus disorder prediction 119 180 - -
Phac7g04235 252 SMART sant 66 114 IPR001005 -
Phac7g04235 252 SMART sant 13 63 IPR001005 -
Phac7g04235 252 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac7g04235 252 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac7g04235 252 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac7g04235 252 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac7g04235 252 FunFam MYB-related transcription factor 13 66 - -
Phac7g04235 252 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Phac7g04235 252 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 198 - -
Phac7g04235 252 Gene3D - 69 143 - -
Phac7g04235 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phac7g04235 252 MobiDBLite consensus disorder prediction 130 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04235 Phac-Chr7 41993734 41995960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04235 1 252 MYB Transcription Factor Family AT1G06180 51.538 1.83e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac7g04235 Myb_DNA-binding 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04235 K09422 - gmx:100806975 399.438