Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04227 ATGGATTCTTCTTCCATTCTCTATTCATCAAACTCCTCAGAATCCCCAATGGGATCCCCTCATCACCATCTCCCTTTCAACGAAAACGACCCTGAAGAGATGCTTCTCTATGGGATGATCACCTCATATCAAGAGAGAAGCAGCTCCTGCAACCTCATCATCAAAGAAGAAGAGGTCAGTAACAGTAGTAGCAGCAAGAGTTTCCGAGGTGTAAGGAGACGGCCATGGGGAAAGTTTGCGGCAGAGATAAGAGATTCTACCCGACATGGCATAAGGGTATGGCTTGGAACATTCGACAACGCCGAGGCTGCTGCGTTGGCGTACGACCAAGCCGCCTTTGCCATGCGAGGCTCTGCTGCAGTTCTTAACTTTCCCGTGGAGAAGGTGAAGGAGTCACTCAGAGACATGGAGTGCTCACTCTCTCAGCTTCAAGGCTGCTCTCCCGTTGTGGCCCTGAAGAGGAGACATTCCTTGGGACGCAAAATGGCTGCAAAGAAGAAGAAGAAGAAGGAAGAGAGTGATGGTGGTGGTGGTGGTGGTGTTAGGGTTGAGAACGTGGTTGTGTTGGAAGACTTGGGGGCAGAGTATTTGGAACAGTTGTTGACGATGTCTTCTGGCGATGCTTGGTGA 630 0.5032 MDSSSILYSSNSSESPMGSPHHHLPFNENDPEEMLLYGMITSYQERSSSCNLIIKEEEVSNSSSSKSFRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDNAEAAALAYDQAAFAMRGSAAVLNFPVEKVKESLRDMECSLSQLQGCSPVVALKRRHSLGRKMAAKKKKKKEESDGGGGGGVRVENVVVLEDLGAEYLEQLLTMSSGDAW* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04227 209 MobiDBLite consensus disorder prediction 1 26 - -
Phac7g04227 209 SMART rav1_2 67 131 IPR001471 GO:0003700|GO:0006355
Phac7g04227 209 PANTHER DNA-BINDING DOMAIN 45 201 IPR044808 GO:0003700|GO:0009873
Phac7g04227 209 PRINTS Ethylene responsive element binding protein signature 107 127 IPR001471 GO:0003700|GO:0006355
Phac7g04227 209 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Phac7g04227 209 CDD AP2 68 126 IPR001471 GO:0003700|GO:0006355
Phac7g04227 209 ProSiteProfiles AP2/ERF domain profile. 67 125 IPR001471 GO:0003700|GO:0006355
Phac7g04227 209 FunFam Ethylene-responsive transcription factor 2 66 127 - -
Phac7g04227 209 MobiDBLite consensus disorder prediction 1 18 - -
Phac7g04227 209 Pfam AP2 domain 68 117 IPR001471 GO:0003700|GO:0006355
Phac7g04227 209 MobiDBLite consensus disorder prediction 159 178 - -
Phac7g04227 209 Gene3D AP2/ERF domain 66 127 IPR036955 GO:0003700|GO:0006355
Phac7g04227 209 SUPERFAMILY DNA-binding domain 68 127 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04227 Phac-Chr7 41954406 41955226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04227 24 201 AP2-EREBP Transcription Factor Family AT3G23240 59.890 2.00e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac7g04227 AP2 4.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04227 K14516 - gmx:100780576 234.187