Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04226 ATGATGAATGAAGAGGGTTCAAAGGGAAAGGGCAAGGATGAAGAAGAGCATGTAAAGTACAGAGGGGTACGTAGGAGGCCATGGGGAAAATATGCAGCAGAGATTCGTGACTCAATGAGACATGGTCAAAGGTTGTGGTTGGGAACATTCACCACAGCAGAAGAAGCTGCTAGAGCCTATGACAGAGCTGCATATGCCATGAGGGGTCCCTTTGCAGTCCTCAATTTTCCTGATCAATACCCTCCTTCACCAGCTGCTGCTGCTTCTTCTTCTTCTATCAATGCTTCTTCTTCTTCTTCTTCTTCTATCAGCTCTTCTTCTTCAGTTTCATCTGTACCCTCTTCAAGCCATGGAAGAGGAAGAGGGAGGAGTGAAGAAGCAAGTGAAGTGTTTGAGTTTGAGTACTTTGATGACAAATTGTTGGAGGAGCTTCTTGGTTATGAAGACAAAAATAAGCATGCCAAAACATTGATGGAGAACCAAAGCCAAGCATATTCCATGGAGAAGATCCAAAAGGAAGAGCATAAAAAGTTGAAGGAGAGAAGGATGGAAGAAAAGGTCCGGTATCGCGGAGTCCGGCGACGGCCGTGGGGGAAGTTTGCGGCGGAGATCAGAGACCCTTCGAAGCAAGGGTCAAGGTTGTGGTTGGGAACCTTTGAGACAGCTGAAGAGGCAGCTAGGGCATATGATCATGCAGCCTTTAGCATGAGGGGTCATGTTGCAATTTTGAATTTTCCTAATCAGTATCATTCTCATTCTCATGTTAGGGTTTATCCTAAAAATTTTACATCACCCTCATCATCATCACCATCACCATCACCCTCCACCATTACTCATTCAAATGGTGGACAACAAAGGCAAGTTTTTGAGTTTGAGTATTTAGATGATAAGGTGTTGGAGGAGCTTCTTGAGCTTGAAGAGAAGAACTGTTGA 933 0.4459 MMNEEGSKGKGKDEEEHVKYRGVRRRPWGKYAAEIRDSMRHGQRLWLGTFTTAEEAARAYDRAAYAMRGPFAVLNFPDQYPPSPAAAASSSSINASSSSSSSISSSSSVSSVPSSSHGRGRGRSEEASEVFEFEYFDDKLLEELLGYEDKNKHAKTLMENQSQAYSMEKIQKEEHKKLKERRMEEKVRYRGVRRRPWGKFAAEIRDPSKQGSRLWLGTFETAEEAARAYDHAAFSMRGHVAILNFPNQYHSHSHVRVYPKNFTSPSSSSPSPSPSTITHSNGGQQRQVFEFEYLDDKVLEELLELEEKNC* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04226 310 SMART rav1_2 188 252 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Phac7g04226 310 MobiDBLite consensus disorder prediction 258 284 - -
Phac7g04226 310 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 MobiDBLite consensus disorder prediction 1 22 - -
Phac7g04226 310 CDD AP2 188 248 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 CDD AP2 19 79 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 MobiDBLite consensus disorder prediction 84 118 - -
Phac7g04226 310 FunFam Ethylene-responsive transcription factor 2 187 247 - -
Phac7g04226 310 PRINTS Ethylene responsive element binding protein signature 189 200 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 PRINTS Ethylene responsive element binding protein signature 212 228 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Phac7g04226 310 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Phac7g04226 310 Gene3D AP2/ERF domain 187 248 IPR036955 GO:0003700|GO:0006355
Phac7g04226 310 PANTHER DNA-BINDING DOMAIN 169 306 IPR044808 GO:0003700|GO:0009873
Phac7g04226 310 ProSiteProfiles AP2/ERF domain profile. 188 246 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 Pfam AP2 domain 188 239 IPR001471 GO:0003700|GO:0006355
Phac7g04226 310 MobiDBLite consensus disorder prediction 82 124 - -
Phac7g04226 310 SUPERFAMILY DNA-binding domain 188 247 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04226 Phac-Chr7 41927415 41933786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04226 184 308 AP2-EREBP Transcription Factor Family AT3G23230 63.492 7.30e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Phac7g04226 AP2 4.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04226 - - gmx:100814296 191.43