Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04224 ATGGATTCCTTAGATGACACCAGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCAAGCGCCCCCTGATTTCCTTTGGCCCAATCACAGTTTGAGCACTGAAATCGACATTCCAGATGATGCTGCTGCTTGTGAAGAGAACATCAAGAAAAGGGTGCGTGCTGATTCATGCTGTAAGGCGGGTTCAAAAGCATGCCGTGAGAAATTGCGAAGGGAGAGACTCAATGAAAGGTTCTGTGACCTGAGCTCTGTTTTGGAACCTGGGAGACCTTTGAGAACAGATAAACCATCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAAACTGAAGCTGAGGAACTGAAAACAAAAAATGAAAAATTATTAGAGGAAATAAAATGTTTAAAGGCCGAGAAAAACGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAGAGGATTGAGAAGCAGTTGAAATCCTTGCCCATGGCACCAGCAGGGTTTATGGCACCCCCTGTAGCTGCTGCTGCTGCATATCAAGCAGGGGTGAACAAGATGGCTGTTTATCCAAATTATGGCTACATCCCAATGTGGCAATATCTTCCTCAATCTGCCAGAGATACATCCCAAGATCATGAGCTTAGGCCTCCTGCTGCATAG 654 0.4419 MDSLDDTSCWDFLDYSFIDQAPPDFLWPNHSLSTEIDIPDDAAACEENIKKRVRADSCCKAGSKACREKLRRERLNERFCDLSSVLEPGRPLRTDKPSILDDAIRVLSQLKTEAEELKTKNEKLLEEIKCLKAEKNELREEKLVLKADKERIEKQLKSLPMAPAGFMAPPVAAAAAYQAGVNKMAVYPNYGYIPMWQYLPQSARDTSQDHELRPPAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04224 217 Coils Coil 100 155 - -
Phac7g04224 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 110 IPR011598 GO:0046983
Phac7g04224 217 PANTHER BHLH TRANSCRIPTION FACTOR 7 217 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Phac7g04224 217 SMART finulus 65 116 IPR011598 GO:0046983
Phac7g04224 217 Gene3D - 62 143 IPR036638 GO:0046983
Phac7g04224 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 137 IPR036638 GO:0046983
Phac7g04224 217 CDD bHLH_AtILR3_like 64 139 - -
Phac7g04224 217 Pfam Helix-loop-helix DNA-binding domain 63 110 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04224 Phac-Chr7 41912538 41916508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04224 50 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 67.456 3.90e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g04224 HLH 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04224 - - gmx:100787583 346.28