Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04216 ATGTTAAAGTCAGTGTCATTTGGAGTGTTGTTAACTTGGTTTCTGGTGCTCACGTGTGTGTTTGCAACAGATATTCAAAGATGTAACTGTGATGATGAGTCGAGCTTCTGGACTATTGAGACCATTCTGGAGTGCCAAAGGGTTGGTGATTTTCTGATTGCTGTGGCCTACTTCTCTATCCCTGTTGAGCTTCTTTACTTTGTTAGTTGCTCAAACTTCCCATTCAAATGGGTCCTCTTTCAGTTCATTGCTTTCATTGTACTTTGTGGAATGACACATTTGCTGAATGGGTGGACTTATGGTCCCCACACTTTTCAACTCATGGTGGCAATCACTGTATTTAAGACTCTCACTGCCTTGGTGTCATGTGCCACTGCCCTTACTCTCCTCACTCTGATCCCTCTGCTGTTGAAAGTGAAGGTTAGGGAATTCATGCTGAAGAAAAAGACCTGGGATCTTGGGAGGGAGGTTGGGTTCATAATGAAACAGAAGGAGGCTTCAGTGCATGTAAGAATGCTTACTCAAGAGATTCGAAAGTCCTTGGACAGGCACAAGATTCTCTACACCACCTTGGTTGAGCTCTCTAAGACACTTGGTTTGCAAAACTGTGCAATTTGGATGCCAAATGATGAGAAAACTGAGATGAACCTTACTCATGAATTGAATGGGAGGAATGCCAACTGTTCTATTCTCATAACTGATCCAGATGTGGTGAGAATCAAGGGGAGTGATGAAGTAAACGTGATTGATTCTGATTCAGCACTTGCCACTGCGAGCAGAGGAGATTCTGGTGTGGCAGGACCAGTTGCTGCAATTCGAATGCCGATGCTTCGGGTTAGCAATTTCAAAGGGGGAACTCCAGAGCTAAGGCAGACATGTTATGCAGTGTTGGTTTTGATTCTTCCTGTCACGGAGCCTAAATCATGGAGCACTCAAGAGCTTGAGATCATTAAGGTGGTTGCTGATCAGGTGGCTGTGGCCTTGTCTCATGCTGCAATTCTTGAGGAGTCTCATCTGATGAGGGAGAAGTTGGAGGAACAGAATCGAGCATTGCAAGTGGAAAAGATCAATGCTATGAGGGCCAACCAGGCTAGAGCAGCATTTCAGAAGGTGATGAGCAGTGGAATGGGAAAGCCTATGCACTCAATTCTGGGGCTGCTTTCAGTGATGCAAGAAGAGAAGTTAAAGCGTGAACAGAAACTCATTGTGGATTGTATGTTCAGAACCAGCACTGTGATGTCAAACCTGCTAAATGATGATGGAAGATTCCCTTTGGAGATGAAGCCTTTTGGACTCCATGCTATGGTGAAGGATGCAGCTTGCTTTGCCAGGTTCATGTGTGTTTATAGGGGCCTTGCCTTTGTTGTTGATGCTGATAAGTCTTTGCCAGAGAATGTTATAGGTGATGAAAAGAGGGTGTTCCAAGTGCTTTTGCATATGGTTGGGAGTGCAATAAATGGTAACCAAGGAGGAGGGGTTCTTGTGTTCCGAGTTTATGCAGAAACTGGTAGTCAAGGGAGGAATGAGCAGGGATGGACAAATTGGAGACCAAGCTCTTCAAGTGGGGATGTAAATATCAGATTTGAGATAGGGATCAATATTGGTGATTCTGAAATGGAAAATTCAGTTCCTTCAGGGCAGCTTCCAATGCGTTTTAGTGATAGGGTTGAGGAAAGATTGAGCTTCAGCATTTGCAAGAGAATAATCCAGTTGATGCAAGGGAACATATGGTATGTACCAAACTCTCAAGGTCATCCTCAGGTCATGGCCATTTCTCTACGGTTTCAACTGCAGCGATCTATTGCTGTATCCATCTCTGAAACTGGGGAAAGTTCTGAGCCATCAAGTTCCAACTCTTTTTTCAGAGGTCTGCAAGTGTTGTTGGTGGACAACGATGATGTTAATAGAGCAGTGAGTCAGAAGTTGCTTCAGAAACTAGGCTGCTCTGTGACCTCTGTTTCTTCAGGATTTGAATGCCTCAGTGTGATTGGCACTGGTGGATGCTCCTTTCAAGTCATTGTGTTGGATCTTCACATGCCTGAGCTTGATGGATTTGAAGTTGCATCAAGGATTCGCAAGTTCGGAAGCCGAAACTGGCCAGTGATTGTTGCATTGACTGCAAGCACAGAAGATTTGTGGGAAAAATGCATGCAAGTTGGCATAAATGGAGTCATAAGAAAGCCAGTTTTGTTGCATGGAATTGCCACTGAACTCAGAAGAATCCTGTTGCAGGGAAATACTGTCATGTGA 2250 0.4436 MLKSVSFGVLLTWFLVLTCVFATDIQRCNCDDESSFWTIETILECQRVGDFLIAVAYFSIPVELLYFVSCSNFPFKWVLFQFIAFIVLCGMTHLLNGWTYGPHTFQLMVAITVFKTLTALVSCATALTLLTLIPLLLKVKVREFMLKKKTWDLGREVGFIMKQKEASVHVRMLTQEIRKSLDRHKILYTTLVELSKTLGLQNCAIWMPNDEKTEMNLTHELNGRNANCSILITDPDVVRIKGSDEVNVIDSDSALATASRGDSGVAGPVAAIRMPMLRVSNFKGGTPELRQTCYAVLVLILPVTEPKSWSTQELEIIKVVADQVAVALSHAAILEESHLMREKLEEQNRALQVEKINAMRANQARAAFQKVMSSGMGKPMHSILGLLSVMQEEKLKREQKLIVDCMFRTSTVMSNLLNDDGRFPLEMKPFGLHAMVKDAACFARFMCVYRGLAFVVDADKSLPENVIGDEKRVFQVLLHMVGSAINGNQGGGVLVFRVYAETGSQGRNEQGWTNWRPSSSSGDVNIRFEIGINIGDSEMENSVPSGQLPMRFSDRVEERLSFSICKRIIQLMQGNIWYVPNSQGHPQVMAISLRFQLQRSIAVSISETGESSEPSSSNSFFRGLQVLLVDNDDVNRAVSQKLLQKLGCSVTSVSSGFECLSVIGTGGCSFQVIVLDLHMPELDGFEVASRIRKFGSRNWPVIVALTASTEDLWEKCMQVGINGVIRKPVLLHGIATELRRILLQGNTVM* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04216 749 Gene3D - 604 741 - -
Phac7g04216 749 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 744 - -
Phac7g04216 749 Gene3D - 330 420 - -
Phac7g04216 749 SMART gaf_1 182 338 IPR003018 GO:0005515
Phac7g04216 749 SUPERFAMILY GAF domain-like 185 331 - -
Phac7g04216 749 CDD REC_ETR-like 624 738 - -
Phac7g04216 749 Gene3D - 421 600 IPR036890 -
Phac7g04216 749 FunFam Ethylene receptor 622 745 - -
Phac7g04216 749 Coils Coil 334 361 - -
Phac7g04216 749 Pfam GAF domain 182 328 IPR003018 GO:0005515
Phac7g04216 749 ProSiteProfiles Response regulatory domain profile. 625 742 IPR001789 GO:0000160
Phac7g04216 749 CDD HATPase_ETR2_ERS2-EIN4-like 462 593 - -
Phac7g04216 749 SUPERFAMILY CheY-like 621 741 IPR011006 -
Phac7g04216 749 FunFam Ethylene receptor 4 331 423 - -
Phac7g04216 749 Gene3D - 162 329 IPR029016 -
Phac7g04216 749 PIRSF Ethylen_sen_hybr_HK 1 749 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Phac7g04216 749 Pfam Response regulator receiver domain 626 730 IPR001789 GO:0000160
Phac7g04216 749 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 425 581 IPR036890 -
Phac7g04216 749 SMART REC_2 624 742 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04216 Phac-Chr7 41822082 41826892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04216 24 742 Miscellaneous Gene Families AT3G04580 55.034 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac7g04216 GAF 5.5e-13 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04216 K14509 - gmx:100802948 1202.96