Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04198 ATGTTGTTCACAATGCTTATATGTCATCACCCTCTGCAGGATGAGATTTCAAGCCCAATCAGTGCTCGAATTTTCGAACTTTGTGACCCTGATTTTTTCCCAGACACACTGCAAAATTCTGAGGTTACCTCCAGCTCCAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATGTAGTAGACAACAAGATCAATATCAATAGCAACATAGTCACCACCTCATCTAGTACTACCACAGCCAGCACCACTACCAACAACAACAACATCAACAACAACACAACAAACAGCAATAACCTGTCCATCTTCTTTGACTCTCAAGATGAAATTGACAATGACATATCAGCCTCCATAGACTTCTCATCATCTCCATCTTTTGCTGTTCCACCACTTCTTGCAATCACAACTCAGCAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACAGGTGCAGCTATCAGCAGCAGGTTCAGTTTTGAAGGGCCTTGCTCATTACCCTACTGATCCTGTGGTTGCACCCCTTATTGGGGCTCCATTAGCATCAGTTTTTGATGATGATTGCATCTCTTCCATCCCTTCTTATTTGCCTCTCAACCCTTCATCTCCCTCTTGTTCTTATCTCGGTCCTGGCATAGGAGCCTACATGCCTCCTCCTGGTTCCCTTACCACTGCCTTGTCTGCAGAGAGTTCTGGATTGTTTGGTGCCAACATTCTACTGGGGTCTGAACTGCAGACACAAGAACTGGACTACCAGGGAGAAAACGGTGGAATATATTGTACAGATTCAATTCAGAGGGTGTTTAACCCCCAAGACCTTCAGGCACTTGGTACTGAGAGTCAGAAACTGGTATCTGCAGCTGGGGGCTCCGGAACTTTGGCACCAGAAATTTCACACTTGGAGGACTCTACCTTGAAGGTTGGAAAACTTTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAACGAAAGAAACTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCAGATAGCAGGCCCCGGGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGGGCCATAGACAAGGAAGTAGCAACCATGAAGAAGATGAGGAAGAGATAACTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGAGTGAACTCTTTCAAATGCAACTATTCCATCCAATCCTTGATTTGA 1254 0.441 MLFTMLICHHPLQDEISSPISARIFELCDPDFFPDTLQNSEVTSSSNCCHEEKSSYATTISPPLDVVDNKININSNIVTTSSSTTTASTTTNNNNINNNTTNSNNLSIFFDSQDEIDNDISASIDFSSSPSFAVPPLLAITTQQDQFDFSSAQPQVQLSAAGSVLKGLAHYPTDPVVAPLIGAPLASVFDDDCISSIPSYLPLNPSSPSCSYLGPGIGAYMPPPGSLTTALSAESSGLFGANILLGSELQTQELDYQGENGGIYCTDSIQRVFNPQDLQALGTESQKLVSAAGGSGTLAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGEGHRQGSSNHEEDEEEITVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04198 417 Pfam CCT motif 320 362 IPR010402 GO:0005515
Phac7g04198 417 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 209 381 IPR045281 GO:0009909
Phac7g04198 417 MobiDBLite consensus disorder prediction 357 387 - -
Phac7g04198 417 MobiDBLite consensus disorder prediction 357 380 - -
Phac7g04198 417 ProSiteProfiles CCT domain profile. 320 362 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04198 Phac-Chr7 41719112 41722316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04198 299 367 C2C2-CO-like Transcription Factor Family AT5G24930 40.580 2.56e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac7g04198 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04198 - - gmx:100793417 639.417