Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04197 ATGTTGCAGGATGTTATCCAACCCCCAACACCAGATGAGCAACTCCCCATTGATGAGATTTCAAGCCCAATCAGTGCTCGAATTTTCGAACTTTGTGACCCTGATTTTTTCCCAGACACACTGCAAAATTCTGAGGTTACCTCCAGCTCCAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATGTAGTAGACAACAAGATCAATATCAATAGCAACATAGTCACCACCTCATCTAGTACTACCACAGCCAGCACCACTACCAACAACAACAACATCAACAACAACACAACAAACAGCAATAACCTGTCCATCTTCTTTGACTCTCAAGATGAAATTGACAATGACATATCAGCCTCCATAGACTTCTCATCATCTCCATCTTTTGCTGTTCCACCACTTCTTGCAATCACAACTCAGCAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACAGGTGCAGCTATCAGCAGCAGGTTCAGTTTTGAAGGGCCTTGCTCATTACCCTACTGATCCTGTGGTTGCACCCCTTATTGGGGCTCCATTAGCATCAGTTTTTGATGATGATTGCATCTCTTCCATCCCTTCTTATTTGCCTCTCAACCCTTCATCTCCCTCTTGTTCTTATCTCGGTCCTGGCATAGGAGCCTACATGCCTCCTCCTGGTTCCCTTACCACTGCCTTGTCTGCAGAGAGTTCTGGATTGTTTGGTGCCAACATTCTACTGGGGTCTGAACTGCAGACACAAGAACTGGACTACCAGGGAGAAAACGGTGGAATATATTGTACAGATTCAATTCAGAGGGTGTTTAACCCCCAAGACCTTCAGGCACTTGGTACTGAGAGTCAGAAACTGGTATCTGCAGCTGGGGGCTCCGGAACTTTGGCACCAGAAATTTCACACTTGGAGGACTCTACCTTGAAGGTTGGAAAACTTTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAACGAAAGAAACTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCAGATAGCAGGCCCCGGGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGGGCCATAGACAAGGAAGTAGCAACCATGAAGAAGATGAGGAAGAGATAACTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGAGTGAACTCTTTCAAATGCAACTATTCCATCCAATCCTTGATTTGA 1266 0.4439 MLQDVIQPPTPDEQLPIDEISSPISARIFELCDPDFFPDTLQNSEVTSSSNCCHEEKSSYATTISPPLDVVDNKININSNIVTTSSSTTTASTTTNNNNINNNTTNSNNLSIFFDSQDEIDNDISASIDFSSSPSFAVPPLLAITTQQDQFDFSSAQPQVQLSAAGSVLKGLAHYPTDPVVAPLIGAPLASVFDDDCISSIPSYLPLNPSSPSCSYLGPGIGAYMPPPGSLTTALSAESSGLFGANILLGSELQTQELDYQGENGGIYCTDSIQRVFNPQDLQALGTESQKLVSAAGGSGTLAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGEGHRQGSSNHEEDEEEITVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04197 421 Pfam CCT motif 324 366 IPR010402 GO:0005515
Phac7g04197 421 MobiDBLite consensus disorder prediction 361 391 - -
Phac7g04197 421 MobiDBLite consensus disorder prediction 361 384 - -
Phac7g04197 421 ProSiteProfiles CCT domain profile. 324 366 IPR010402 GO:0005515
Phac7g04197 421 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 213 385 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04197 Phac-Chr7 41717431 41722316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04197 324 382 C2C2-CO-like Transcription Factor Family AT5G57660 45.312 3.37e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac7g04197 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04197 - - gmx:100793417 665.611