Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04170 ATGTCGGAGAAGGAGTGCAAGCACCACAAGGGCAAGAAGAGGAAGATCTTCCGCCAAGTCTTCTGGGGCATAGTGGTGTTCCTCTTCCTTGTCTTGCTCGTTATTCTTCTCATATGGGCCATCCTTAGACCCACCAAACCCACCTTCACTCTCCAAGACGTCACCGTTTACGCCTTCAACGCCACCGTCGCCAACTTCCTCACATCCAATTTCCAAGTCACGCTTATCTCGCGCAACCCCAACGACCACATCGGAGTCTACTACGACCGCCTCGAAACCTACGTCACTTACCGGAGCCAGCAGGTCACCTACCGCACCGCCATCCCTCCCATCTACCAGGGCCACAAAGACGTCAACGTTTGGTCTCCCTTCGTCTACGGCACCAACATCCCCGTCGCACCCTTCAACTTCCTCGGCCTCAGCCAGGACCAGACGGAGGGTAACGTCCTCGTCACCATCAAAGCCGACGGCAGGGTCCGCTGGAAGGTCGGCACCTTCATCTCCGGCCACTACCACCTCTACGTCCGCTGCCCCGCCTTCATCTCCTTCGGCCCCCGCAGCAACGGCATCGCCGTCGGAGAAAACGCCATGAAGTTCCAGATCATCCAACGGTGCTCCGTCAGCCAACCCCAACTAAACGGTGCGTATTACGGCCCCGCTATTCCTCCAGTCGAGGCGCCACGTCCCCGCCGCCACAGAAATTGCTGCTGCTGCCTCTTCGGCTTCTGCTGGAAGCTTCTCCTCGCAGTCATAATCCTCCTCGTCCTCGGATTCCTCGTCTTATGGGCCGTGCTCCAGCCACGCGCCTTCAGGTTGCAAGTCACCGACGCGACGCTCACGCAGTTCAACTACACCTCCAACGACAACACGCTCCACTACAACCTCGTCCTCAACTTCACTGCACGAAACCCCAACAAGAAGATCGACTTCTACTACGAGAGCGTGGAGAGCCACGTGTCATACGGCGGTGTCAGGTTCGCGTCCGCGGAGGTGCTGACGCTGCGTGACTCGTTCCGGCTACGCACGAAGAGCACGGACCGCATGAGCGGCGTTTTCACGGGGCATTACAAGACGGTGGTGGATCAAGAGCAGGTGAAGAAGCGCTTGGAAGAAGATGAGAAAAAGAGGGTTTTTGATTTCGATGTGGGACTCCACTTTAAGCTTAAGTTCATCATTGGCGATTTCAACAGTTCTAGCACCAAGGCCAAGGCAAAATGTGAGCTTCAGGTCCCTTTGAGTTCCGACGGAAAAACTCCAATGGCGACGGAGTTTGCATCCACCAACTGCCATATTTAG 1296 0.564 MSEKECKHHKGKKRKIFRQVFWGIVVFLFLVLLVILLIWAILRPTKPTFTLQDVTVYAFNATVANFLTSNFQVTLISRNPNDHIGVYYDRLETYVTYRSQQVTYRTAIPPIYQGHKDVNVWSPFVYGTNIPVAPFNFLGLSQDQTEGNVLVTIKADGRVRWKVGTFISGHYHLYVRCPAFISFGPRSNGIAVGENAMKFQIIQRCSVSQPQLNGAYYGPAIPPVEAPRPRRHRNCCCCLFGFCWKLLLAVIILLVLGFLVLWAVLQPRAFRLQVTDATLTQFNYTSNDNTLHYNLVLNFTARNPNKKIDFYYESVESHVSYGGVRFASAEVLTLRDSFRLRTKSTDRMSGVFTGHYKTVVDQEQVKKRLEEDEKKRVFDFDVGLHFKLKFIIGDFNSSSTKAKAKCELQVPLSSDGKTPMATEFASTNCHI* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04170 431 PANTHER OS05G0367900 PROTEIN 19 197 IPR044839 GO:0098542
Phac7g04170 431 Pfam Late embryogenesis abundant protein 299 395 IPR004864 -
Phac7g04170 431 Pfam Late embryogenesis abundant protein 77 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04170 Phac-Chr7 41511526 41517020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04170 271 413 SNARE and Associated Proteins AT1G32270 29.371 4.14e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04170 - - gmx:100788592 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac7g04170 7 41511526 41517020 Phac7g04170 7 41511526 41517020 ECH
Phac1g02827 1 37298889 37300269 Phac7g04170 7 41511526 41517020 PCT