Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04164 ATGACAGTGGCACTGACAAAGTGTTTGCCGTTGCTCCTTTTCTCGCTGTGGACGGTAGTGTTAACCGAAACGGACCCGAACGATGTGGGGATTCTGAACAGTTTTCGAAGAGGTTTGAAGAACAAAGAGCTCTTACCGTGGCCGGAAGAAGGAGGAGACCCGTGTGGGAATCCTCCATGGAAGTACATCTTCTGCAATGGCAACAGAGTTTCTCAGATTCAGACCAAGAACTTGGGTCTGGTGGGCCCGCTACCCTCCAACTTCAACAAGCTTTCCATGTTGGAGAATCTGGGTATGCAGAACAACAACCTCAACGGGCCCTTACCCTCCTTCAATGGCTTGTCAAACTTGAAATACGCGTTTCTCAACCGCAACGGCTTTGAATCCATTCCCGGGGATTTTTTCCGAGGGCTTCGGAGTCTCCAGGTGTTGGCTTTGGATTACAATAATCTCAATGCCTCTTCTGGTGGCTGGGTGCTTCCTCAAACTTTGGAAGATTCGGCGCAGTTGAGGAACTTTTCTTGCATGAGCTGCAACTTGGTGGGTCCCATTCCTGCGTTTCTCGGCTCATTGCCGTCGCTGGAGGTGCTGCAGCTCTCCGGGAATAGCTTGACAGGGGAGATTCCGGCGGCGTTGAACGCCGTTCCGGCGTTGCAGATTCTCTGGCTAAACAACCAGCGCGGGGACGGACTTACTGGGAAAATCGAAGTTGTTGCGAGCATGATTTCATTGACGAGTTTGTGGCTTCACGGGAATAAGTTTAGCGGGAGTATTCCGATGAACATTGGGGATTTGGTTTCGCTGAGGGATTTGGATCTTAATGGGAATGATTTTGTTGGGTTGATTCCGCGTGGTTTGAGTGGGATGAAGTTGCAGCGGTTGGATTTGAATAATAACCACTTCATGGGTCCGATCCCTGATTTTGCTGCGGATAAAGTTAGTTTTGAAAGCAATAATTTTTGCTTGTCGAAGCCTGGGGTTATGTGTGCGTTTGAGGTGATGGCGCTGTTGGATTTTCTTGGGGGGTTGGGTTACCCTCAGATTTTGGTTGATTCGTGGAGTGGGAATAATCCGTGTGATGGGCCATGGTTGGGGATAAAGTGCAATGGGGATGGAAAGGTGGAAATGATTATTTTGAGTAACTTTAATCTTAGTGGTACTTTGAGTCCTTCTGTTGCCAAGTTGGATTCTCTTGTTGGAATAAGGTTGGGAGGTAATGATATCAGTGGTAGAATACCCAGTAATTGGACTAGTTTGAGATCATTGACATTGTTGGATCTGAGTGGTAATAACATATCTCTTCCCTTGCCGAGTTTTGGGAAAGGGGTGAAGCTTGTGATTGATGCCACAGAAGTTTCTCTTTCTCCACCAGGTTCTGGTTCTGGTTCTGGTTCTGGTAAGGTTGAACCTCCTTCATCTGATAAGGGTAATCCTAATCCATCTGAAGAATCTAGTCCCAATCCAAAGCCTCGCAGTGTTTCTCTTGAGTCAAACAATTCCAGAGGGAAAAGCTTGGTTCTAATTGTGGCTCCTATTGCAGGTGTTGCAGCTGCGGCTTTTGTTCTCATTCCGCTTTATGTATATTGTTTCAGGAAGAGAAAGGGTGTCTCTGACAGAGCAGGGTCTCTGGTGATTCACCCCGGAGATCCTTCAGACTCGAACAATGCGCTGAAGGTTGTAATTGCTAACAACAACAACGGGAGTGTTTCAACAGTGACTGGCGCTGGGTCTGGGACTCTAAATGGAAGTGGGGAGTCTCATGTCATTGAATCTGGGAACCTTGTGATATCGGTTCAGGTCCTTCGAAATGTGACCAAGAATTTTGCACGGGAGAATGAGCTTGGACGCGGTGGATTTGGAGTAGTTTACAAGGGAGAATTGGATGATGGGACTAAGATTGCGGTGAAACGAATGGAATCGGGTGTCATTACCAGCAAAGCCTTGGATGAGTTCCAGTCTGAGATTGCAGTTCTATCAAACGTCCGGCACCGGCATTTGGTATCTCTGTTGGGTTATTCGGTTGAAGGTAATGAGAGGATTCTGGTTTATGAGTATATGCCACAAGGGGCTCTCAGTATGCATCTTTTCCACTGGAAGAGCTTGCAACTGGAACCACTCTCTTGGAAGAGGAGGCTCAATATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCACAGTCTGGCACACCAGATCTTCATCCACAGAGATCTTAAATCATCAAATATTTTGCTTGGGGATGATTTTAGAGCAAAAGTCTCGGATTTTGGACTGGTAAAACTTGCTCCCGATGGCAAAAAATCTGTAGTGACCCGGCTTGCTGGTACATTTGGATACTTGGCACCAGAATATGCAGTGACAGGCAAAGTCACCACGAAAGCAGATGTTTTCAGTTTCGGTGTGGTGCTAATGGAGCTGCTAACTGGATTAATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAGTACTTGGCATCGTGGTTCTGGCATGTAAAATCAGACAAGGAGAAACTAATGGCTGCTGTTGACCCTTCCCTGGACATAAAGGAAGAAATGTTCGACATTGTCTCCATCATTGCCGAGTTAGCTGGGCACTGCACTGCCAGAGAACCATACCAAAGACCAGATATGAGTCATGCTGTGAATGTTCTTGGACCGCTTGTTGAGAAATGGAAACCACTAGATGATGACACCGAGGAGTATTCTGGCATAGACTACACTCTTCCCCTTAACCAAATGGTGAAGGATTGGCAGGAGACAGAAGGAAAAGAGTTGAGCTATGTGGACCTGCAGGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGGTTTGCAGAGTCTTTCACTTCTGTTGATGGCCGCTGA 2865 0.4705 MTVALTKCLPLLLFSLWTVVLTETDPNDVGILNSFRRGLKNKELLPWPEEGGDPCGNPPWKYIFCNGNRVSQIQTKNLGLVGPLPSNFNKLSMLENLGMQNNNLNGPLPSFNGLSNLKYAFLNRNGFESIPGDFFRGLRSLQVLALDYNNLNASSGGWVLPQTLEDSAQLRNFSCMSCNLVGPIPAFLGSLPSLEVLQLSGNSLTGEIPAALNAVPALQILWLNNQRGDGLTGKIEVVASMISLTSLWLHGNKFSGSIPMNIGDLVSLRDLDLNGNDFVGLIPRGLSGMKLQRLDLNNNHFMGPIPDFAADKVSFESNNFCLSKPGVMCAFEVMALLDFLGGLGYPQILVDSWSGNNPCDGPWLGIKCNGDGKVEMIILSNFNLSGTLSPSVAKLDSLVGIRLGGNDISGRIPSNWTSLRSLTLLDLSGNNISLPLPSFGKGVKLVIDATEVSLSPPGSGSGSGSGKVEPPSSDKGNPNPSEESSPNPKPRSVSLESNNSRGKSLVLIVAPIAGVAAAAFVLIPLYVYCFRKRKGVSDRAGSLVIHPGDPSDSNNALKVVIANNNNGSVSTVTGAGSGTLNGSGESHVIESGNLVISVQVLRNVTKNFARENELGRGGFGVVYKGELDDGTKIAVKRMESGVITSKALDEFQSEIAVLSNVRHRHLVSLLGYSVEGNERILVYEYMPQGALSMHLFHWKSLQLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEESQYLASWFWHVKSDKEKLMAAVDPSLDIKEEMFDIVSIIAELAGHCTAREPYQRPDMSHAVNVLGPLVEKWKPLDDDTEEYSGIDYTLPLNQMVKDWQETEGKELSYVDLQDSKSSIPARPTGFAESFTSVDGR* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04164 954 SMART LRR_typ_2 419 442 IPR003591 -
Phac7g04164 954 SMART LRR_typ_2 265 288 IPR003591 -
Phac7g04164 954 SMART LRR_typ_2 138 167 IPR003591 -
Phac7g04164 954 SMART LRR_typ_2 191 215 IPR003591 -
Phac7g04164 954 SMART LRR_typ_2 114 137 IPR003591 -
Phac7g04164 954 MobiDBLite consensus disorder prediction 454 497 - -
Phac7g04164 954 CDD STKc_IRAK 614 887 - -
Phac7g04164 954 FunFam receptor protein kinase TMK1 570 685 - -
Phac7g04164 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 733 745 IPR008271 GO:0004672|GO:0006468
Phac7g04164 954 PANTHER OSJNBA0070M12.3 PROTEIN 11 954 - -
Phac7g04164 954 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Phac7g04164 954 SUPERFAMILY Protein kinase-like (PK-like) 586 884 IPR011009 -
Phac7g04164 954 Gene3D Transferase(Phosphotransferase) domain 1 686 904 - -
Phac7g04164 954 SUPERFAMILY L domain-like 332 441 - -
Phac7g04164 954 SMART serkin_6 608 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04164 954 FunFam Leucine-rich repeat receptor-like kinase 331 454 - -
Phac7g04164 954 Gene3D Ribonuclease Inhibitor 331 450 IPR032675 -
Phac7g04164 954 Pfam Protein tyrosine and serine/threonine kinase 611 883 IPR001245 GO:0004672|GO:0006468
Phac7g04164 954 Gene3D Ribonuclease Inhibitor 26 327 IPR032675 -
Phac7g04164 954 FunFam Receptor-like kinase TMK4 26 326 - -
Phac7g04164 954 MobiDBLite consensus disorder prediction 934 954 - -
Phac7g04164 954 Gene3D Phosphorylase Kinase; domain 1 577 685 - -
Phac7g04164 954 FunFam receptor protein kinase TMK1 686 903 - -
Phac7g04164 954 Pfam Leucine rich repeat N-terminal domain 334 369 IPR013210 -
Phac7g04164 954 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Phac7g04164 954 ProSiteProfiles Protein kinase domain profile. 608 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04164 954 SUPERFAMILY L domain-like 24 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04164 Phac-Chr7 41470522 41474639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04164 82 921 Receptor kinase-like Gene Family AT1G55610 29.543 1.73e-76 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Phac7g04164 PK_Tyr_Ser-Thr 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04164 - - gmx:100781857 1555.42