Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04158 ATGGCGACATATTTTCAAAGTAACCCCAAAATTCAGTCAGGTGCTGACGGCCTTCAAACTCTCGTACTAATGAACCCTGACTATGTCCAATACTCCGACGCGCCGCCGCCACCCCACGGCGGAAACCACCTGTTTCTCAACTCCGCCGCCACCGTTGCCAACAACACCTCCCTGCTGAACCTCCCCCATGCGCCGTCCCCTCACACTCAGCAATTCGTCGGCGTGCCGCTTTCCGCCACAGCCCAGGAGTCGCCGCCGTCCATGCCCCACGACGTCTCCGCCCTGCATGGCTTCCTGCCGCGCATGCAGTACAACCTTTGGAACACAATTGACCCCAGCACGGCGGCGCGTGAGGTCCCACGCGCCTCTCAGGGACTATCGCTCAGCCTGCACGGTGAGGAGGTGCTCCCATCGTCGTCCTCCGCTTCCGGGGCCCCCAACGGCGGCGGTATGGTGGGGATTCAGAGCGTGCTCTTGAGTTCCAAGTACTTGAAGGCCACGCAAGAACTTCTGGACGAGGTTGTGAATGTTAACAGCGGAATTAAGGTTGAACAAGCGAAGAAGAGCTTCGAGAAAACTAAGGTGGTTGGAGAATCATCAACCGCCGCCAGTGGTGACGGCGGAGAGGGAAGTGGGAAACGTAGCTCTGAATTGTCAACTACAGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTAATCAACATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCACAACCAGATGCAGATTGTGACATCCTCGTTTGAGCAAGTTGCAGGGATTGGTTCTGCGAGAACGTACACTGCACTTGCATTGCAAACAATTTCAAAGCAATTTCGATGTTTGAAGGATGCAATAACAGGTCAAATCAGAGCTGCAAATAGGAGTTTGGGAGAAGAGGATTGTTTTGGGGCTAAAGTTGAAGGTTCTAGGCTGAAATATGTGGACCATCATCTACGCCAACAGAGAGCTATTCAACAGTTAGGAATGATCCATCACAATGCTTGGAGACCCCAGAGAGGATTGCCAGAGAGATCGGTTTCTGTCTTACGTGCTTGGCTCTTTGAACACTTTCTCCACCCCTACCCCAAGGACTCCGACAAACACATGCTTGCAAAACAAACAGGGCTTACCAGGAGTCAGGTTTCAAATTGGTTCATAAATGCTCGAGTTCGGCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGATGAAAGAACACGAACTAAATGGGTCTGAGGAGAAATCAAGCAAGAGTGGTGAAGATCCTGCGATGAAAAATTCAACTCCACGAGAGAAACATCCCACCTCTGAAATTGAATCGAAAAGTTTTAGTTCTAAACAAGATGTTTCTAAAAGTCAGAACAATTCAATGGCTTCAACTTCACCATCAACATCACCCATAGGGGGAAGAAATGTTAAGAATCAATTCAGTTTCATTGGGTCATCAACACAAGGAAGCCCCAAGAAAGCAAGGAACCATGAAATTCTACCCTCTCCAAATCGTGCTTCTTCAATGAACATGGATGTTAAAATGAATGAGGGCAACAATGAACAACAAGTTTCGATGGATGAGAGACAGAGTAGGGATGGATACTCTTTCATGGGGAGCCAAACAAACTTCACTAGTGGTTTTGGTCAATACCCAATGGAGGAAATTGGTAGGTTTGATGCTGAGCAATTCACACCAAGGTTTTCAGGTAATGGTGTTTCCCTCACTCTTGGTCTTCCTCATTGTGACACATTGTCAGGAACACATCAAACTTTTCTCCCTAACCAAAACATTCAGCTAGGAAGAGGGTTGGACATTGGTCAACCAAATCAATTTGGTGTCTTAAACAATTCCACTTCTCACTCTTCAGCAGCATATGAGACCATGAACATGCAGAACCCAAAGAGGTTTGCAGCACAATTGGTTCTAGACTTTGTGGCCTAA 1950 0.4805 MATYFQSNPKIQSGADGLQTLVLMNPDYVQYSDAPPPPHGGNHLFLNSAATVANNTSLLNLPHAPSPHTQQFVGVPLSATAQESPPSMPHDVSALHGFLPRMQYNLWNTIDPSTAAREVPRASQGLSLSLHGEEVLPSSSSASGAPNGGGMVGIQSVLLSSKYLKATQELLDEVVNVNSGIKVEQAKKSFEKTKVVGESSTAASGDGGEGSGKRSSELSTTERQEIQMKKAKLINMLDEVEQRYRQYHNQMQIVTSSFEQVAGIGSARTYTALALQTISKQFRCLKDAITGQIRAANRSLGEEDCFGAKVEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKEHELNGSEEKSSKSGEDPAMKNSTPREKHPTSEIESKSFSSKQDVSKSQNNSMASTSPSTSPIGGRNVKNQFSFIGSSTQGSPKKARNHEILPSPNRASSMNMDVKMNEGNNEQQVSMDERQSRDGYSFMGSQTNFTSGFGQYPMEEIGRFDAEQFTPRFSGNGVSLTLGLPHCDTLSGTHQTFLPNQNIQLGRGLDIGQPNQFGVLNNSTSHSSAAYETMNMQNPKRFAAQLVLDFVA* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04158 649 Pfam Homeobox KN domain 356 395 IPR008422 GO:0003677|GO:0006355
Phac7g04158 649 Pfam Associated with HOX 157 290 IPR006563 -
Phac7g04158 649 CDD homeodomain 339 400 IPR001356 GO:0003677
Phac7g04158 649 ProSiteProfiles 'Homeobox' domain profile. 336 399 IPR001356 GO:0003677
Phac7g04158 649 SUPERFAMILY Homeodomain-like 340 406 IPR009057 -
Phac7g04158 649 MobiDBLite consensus disorder prediction 194 223 - -
Phac7g04158 649 SMART prehox3 152 291 IPR006563 -
Phac7g04158 649 Coils Coil 223 250 - -
Phac7g04158 649 MobiDBLite consensus disorder prediction 411 512 - -
Phac7g04158 649 FunFam BEL1-like homeodomain protein 9 342 404 - -
Phac7g04158 649 MobiDBLite consensus disorder prediction 446 495 - -
Phac7g04158 649 MobiDBLite consensus disorder prediction 411 445 - -
Phac7g04158 649 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 80 425 - -
Phac7g04158 649 Gene3D - 335 412 - -
Phac7g04158 649 SMART HOX_1 339 403 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04158 Phac-Chr7 41428343 41433563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04158 1 649 Homeobox Transcription Factor Family AT2G35940 49.176 5.03e-174 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac7g04158 POX 7.6e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04158 - - gmx:100810851 1079.32