Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04157 ATGGAGGAAATTGAAGTGCCTCAATACTTCATTTGCCCCATATCACTCCAAATCATGAGGGACCCCGTTACGGCCATAACGGGCATAACTTACGATCGAGAGAGCATTGAACAATGGCTATTCGATAACAAGAACAGCACATGCCCCGTGTCCAAACAACTCCTCCCGAGAGACTCTGACCTAACCCCTAACCACACCCTTCGACGCTTGATCCAAGCCTGGTGCACCCAAAACGCTTCACTTGGCATCGTTCGCATTCCAACTCCCAAACCCCCTCTCCACAAAATCCAAGTCCTTAAACTCCTCAAAGACCTCCACAACCACAAAACCCTCTTGCAGTTGGAGCTTCTTGCTGCAGAGAACGAGAGGAACAGAAAGTGCTTGCTTGAGGCTGGGGTTCCACGGGCAATGATCATCTTCATCATCAACTGCTATAGAAAAGGTCAAATCCAAAAGGGTCTCCATGAAGCTCTTAGCATATTGCAGTTTGTCAAGATCCCCAAGAACGAATGGCCGCAGCTTGTGAAGGACCACGACCAAACATTGGATTCTTTAACATGGATTCTGTGCCACGAGGAAGTGGAAAACTCCATAGCTGTGAAATCCCACGTGGTTCTGCTTCTAAAGAAGATCATCAACAAGGGCGACACGTGTCACGTTCTGGAGAGACTGAAACCCGAATTCTTCGAAGCAATGGTGAAGATTCTGAGACACGGAGTGACCCAACAAGGAACGAGTGCAGCACTTCACGTTCTGTTAAGCGCTTCTTCTTCGACGCGAAACAGGATCATGATGGTGGAAGCGGGCGTGGTTCACGAAGTGGTGGAGATCGAACTGGGGGCGCCGGAGAAGAGAGTGACGGAACTGACGCTGGCTATATTGTTCCACCTGTGTTGTTGCGCCAACGGGAGAGCCAAGTTTCTGAGCCATGAAGGGGCGATCGCGGTGGTGACGGAGAGGATACTGAAGGTGTCGGCGGCGGTGGACGATAGGGCGGTGTTTGTTTTGGCGATGGTGGCGAAGTTTTCGGGGACGAAGGTGGTTTTGCAGGAGATGTTGAAGATGGGAAGCATGGCGAAGCTTTGCATGGTGGTTCAGGCTGATAGGGCAAAGTATTTGAAGGACAAAGCCATGGAAGTTCTGAAGGAACACTCTGAGGTCTGGACTGACTCGCTTTGCTTTCCTCATTCGTCGTTTCGCGCCTACGTCCGCTACTGA 1218 0.5074 MEEIEVPQYFICPISLQIMRDPVTAITGITYDRESIEQWLFDNKNSTCPVSKQLLPRDSDLTPNHTLRRLIQAWCTQNASLGIVRIPTPKPPLHKIQVLKLLKDLHNHKTLLQLELLAAENERNRKCLLEAGVPRAMIIFIINCYRKGQIQKGLHEALSILQFVKIPKNEWPQLVKDHDQTLDSLTWILCHEEVENSIAVKSHVVLLLKKIINKGDTCHVLERLKPEFFEAMVKILRHGVTQQGTSAALHVLLSASSSTRNRIMMVEAGVVHEVVEIELGAPEKRVTELTLAILFHLCCCANGRAKFLSHEGAIAVVTERILKVSAAVDDRAVFVLAMVAKFSGTKVVLQEMLKMGSMAKLCMVVQADRAKYLKDKAMEVLKEHSEVWTDSLCFPHSSFRAYVRY* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04157 405 SUPERFAMILY RING/U-box 3 79 - -
Phac7g04157 405 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Phac7g04157 405 PANTHER WDSAM1 PROTEIN 2 395 IPR045185 GO:0061630
Phac7g04157 405 Coils Coil 102 122 - -
Phac7g04157 405 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Phac7g04157 405 Pfam U-box domain 6 78 IPR003613 GO:0004842|GO:0016567
Phac7g04157 405 SUPERFAMILY ARM repeat 114 371 IPR016024 -
Phac7g04157 405 Gene3D - 97 390 IPR011989 -
Phac7g04157 405 CDD RING-Ubox_PUB 7 58 IPR045210 -
Phac7g04157 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 81 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04157 Phac-Chr7 41421698 41424143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04157 2 394 U-box Gene Family AT3G11840 41.043 1.26e-114 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04157 - - gmx:100798446 641.343