Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04151 ATGAACGACTTGTTCTCGGGCTCCTTCTCCCGCAACACCGACCAAGTCTCGCCGGACAACCATCACCATGTGGTGGAGATGGCGGCGGTGGAGGGCGGCGTGAACCTGGATAAGTTCTTTGAGGAAGTTGAGCAGGTAAAAGAAGAGCTGAAAGAGCTAGAGCATCTCCATGAGAACTTGCGTGGTTCCCACGAAAAAAGCAAGACCCTTCACAGTGCTAATGCTGTGAAAGAGCTTCGCTCACGCATGGATGCTGATGTAGCACTGGCTTTGAAGAAAGCCAAGCTGATCAAGATCCGGCTCGAAGCGTTAGACCGGTCCAACCAGGCAAGTCGAAACTTGCCTGGTTCTGGACCGGGTTCGTCCTCGGACCGGACCAGAACATCTGTGGTGAACGGATTGAGGAAGAATCTGAAGGACTCCATGGACAACTTCAATAGCCTTAGACAACAGATATCGTCGGAGTACAGGGAAACCGTGCAGCGGAGATATTATACCGTTACCGGAGAGAACCCTGACGACAAAACCATTGACCTTCTCATTTCTACCGGTGAGAGTGAAACATTTTTGCAGAAAGCGATTCAGCAGCAAGGTAGAGCGAGTGTGATGGAGACGATCCAAGAGATTCAAGAAAGGCACGACACAGTGAAAGAGATAGAGAGAAACCTGAATGAGCTGCACCAGGTGTTCCTTGACATGGCTGTGTTGGTGCAGTCCCAGGGAGAACAATTGGACGATATCGAGAGCCATGTGGCACGTGCCAACTCGTACGTGCGAGGTGGGGTCCAGCAGCTTCAAGTAGCAAGGAAGCACCAGAAAAACACCCGAAAGTGGACCTTCTTCGCCATCATTCTGCTCCTCATTATCATCTTGATCATAGTTCTCCCCATAGTTCTAAGAAATTGA 906 0.5044 MNDLFSGSFSRNTDQVSPDNHHHVVEMAAVEGGVNLDKFFEEVEQVKEELKELEHLHENLRGSHEKSKTLHSANAVKELRSRMDADVALALKKAKLIKIRLEALDRSNQASRNLPGSGPGSSSDRTRTSVVNGLRKNLKDSMDNFNSLRQQISSEYRETVQRRYYTVTGENPDDKTIDLLISTGESETFLQKAIQQQGRASVMETIQEIQERHDTVKEIERNLNELHQVFLDMAVLVQSQGEQLDDIESHVARANSYVRGGVQQLQVARKHQKNTRKWTFFAIILLLIIILIIVLPIVLRN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04151 301 SMART SynN_4 31 157 IPR006011 GO:0016020
Phac7g04151 301 Coils Coil 36 63 - -
Phac7g04151 301 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 33 163 - -
Phac7g04151 301 CDD SynN 36 193 IPR006011 GO:0016020
Phac7g04151 301 Gene3D - 195 299 - -
Phac7g04151 301 CDD SNARE_syntaxin1-like 205 266 - -
Phac7g04151 301 SMART tSNARE_6 201 268 IPR000727 -
Phac7g04151 301 Coils Coil 131 151 - -
Phac7g04151 301 ProSitePatterns Syntaxin / epimorphin family signature. 212 251 IPR006012 GO:0005484|GO:0006886|GO:0016020
Phac7g04151 301 Pfam SNARE domain 242 294 IPR000727 -
Phac7g04151 301 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 206 268 IPR000727 -
Phac7g04151 301 MobiDBLite consensus disorder prediction 109 129 - -
Phac7g04151 301 Gene3D - 34 166 - -
Phac7g04151 301 Pfam Syntaxin 38 241 IPR006011 GO:0016020
Phac7g04151 301 PANTHER SYNTAXIN 53 291 IPR045242 -
Phac7g04151 301 SUPERFAMILY t-snare proteins 34 261 IPR010989 GO:0016020|GO:0016192
Phac7g04151 301 FunFam Syntaxin 132 199 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04151 Phac-Chr7 41348736 41351102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04151 28 280 SNARE and Associated Proteins AT3G11820 74.704 3.98e-140 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04151 K08486 - gmx:100793347 461.84