Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g04148 | ATGGCTATGCAAACTGCTTACCTGAAAGAACACGAAGGAATTGCTCACAATTCTGTTGGACAATTGTCATCTGCAACTTCAGCTCCATGGTTGAATGGCTTAGGATCTCAACCAGTCTGTGGGGATTATTGTGGCCAAAGCAAGCCCTTTGCTTTGGAGTTTTCCAACTATGTCGACCAATTTGCTGGTGGTAAGCAAACAGCACGAGGACATGCAAACCAGTTTTCCATCTTTTCTGATGACTGTAAAATGTTGGGCGATGCCCAAAATCCTCCGGCAACCTTAGCACCGCAGTCATCAGTTGCTGAGCCCCCCAACCATTTGGAGATAGGGTTTAATCAGCCTATGATCTGTGCACCATATCCCTGTATGGATCAGTTTTGTGGGCTCGTCTCAGCTTATGGACCTCAAATTCCGGGACGTGTAATGCTTCCGCTTAACATGGCTTCTGATGATGGACCAACCTACGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCAGGCAGTCACGCGCTAAGGCAGTTCTTGAGAATAAAATGGTTAAACGTCGCAAGCCTTACATGCATGAATCACGCCATCTGCATGCAATGAGGAGACCAAGAGGAAATGGTGGTCGCTTCTTGAACACAAAAAACTCCAGCAATGAAAATGGTGGAAATGATCTTGAAGGGAATCAAATGGGTGGCCTACAATTTCTGTCTAGTGCCTCTCAGAGTTCTGAAATGATGCAATCTGATGTTGGAATGCATTCACCAATGGAGACAGATCAATACAGTCCAAACATGTCTAGTTCAGAAGTGAGTAGCATGTATTCAAGGGAAGGTTTCGATGGCTTTTCTGTGAATCCTCTTGGATCTTCTTCTGTTCATCCTCTTGGATCTTCTGTCCATTCTATAGCAGACATGATAGGTAGTGGAAATGGTATCACCATGCCCACTAGATGGGCTTAA | 954 | 0.4507 | MAMQTAYLKEHEGIAHNSVGQLSSATSAPWLNGLGSQPVCGDYCGQSKPFALEFSNYVDQFAGGKQTARGHANQFSIFSDDCKMLGDAQNPPATLAPQSSVAEPPNHLEIGFNQPMICAPYPCMDQFCGLVSAYGPQIPGRVMLPLNMASDDGPTYVNAKQYHGIIRRRQSRAKAVLENKMVKRRKPYMHESRHLHAMRRPRGNGGRFLNTKNSSNENGGNDLEGNQMGGLQFLSSASQSSEMMQSDVGMHSPMETDQYSPNMSSSEVSSMYSREGFDGFSVNPLGSSSVHPLGSSVHSIADMIGSGNGITMPTRWA* | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g04148 | 317 | MobiDBLite | consensus disorder prediction | 199 | 223 | - | - | |
Phac7g04148 | 317 | Gene3D | - | 152 | 212 | - | - | |
Phac7g04148 | 317 | PRINTS | CCAAT-binding transcription factor subunit B signature | 154 | 176 | IPR001289 | GO:0003700|GO:0006355 | |
Phac7g04148 | 317 | PRINTS | CCAAT-binding transcription factor subunit B signature | 185 | 208 | IPR001289 | GO:0003700|GO:0006355 | |
Phac7g04148 | 317 | MobiDBLite | consensus disorder prediction | 207 | 223 | - | - | |
Phac7g04148 | 317 | Pfam | CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B | 154 | 208 | IPR001289 | GO:0003700|GO:0006355 | |
Phac7g04148 | 317 | ProSiteProfiles | NF-YA/HAP2 family profile. | 151 | 211 | IPR001289 | GO:0003700|GO:0006355 | |
Phac7g04148 | 317 | PANTHER | TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED | 63 | 281 | IPR001289 | GO:0003700|GO:0006355 | |
Phac7g04148 | 317 | SMART | cbf3 | 150 | 211 | IPR001289 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g04148 | Phac-Chr7 | 41337069 | 41342535 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g04148 | 1 | 316 | CCAAT-HAP2 Transcription Factor Family | AT3G05690 | 39.039 | 1.94e-48 | 163 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YA | Phac7g04148 | CBFB_NFYA | 5.7e-25 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g04148 | K08064 | - | gmx:100808195 | 434.106 |