Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04144 ATGCTGCTACTTATTCTTCTTCTTCTTCTACTTTTACTACTCACTCTCAGAATTTACTTTTTATCAGTAAGAAAAATTAAATCGACTGTTTGGAGGGTGAAGATGGCTATGCAAACTGCTTACCTGAAAGAACACGAAGGAATTGCTCACAATTCTGTTGGACAATTGTCATCTGCAACTTCAGCTCCATGGTTGAATGGCTTAGGATCTCAACCAGTCTGTGGGGATTATTGTGGCCAAAGCAAGCCCTTTGCTTTGGAGTTTTCCAACTATGTCGACCAATTTGCTGGTGATGACTGTAAAATGTTGGGCGATGCCCAAAATCCTCCGGCAACCTTAGCACCGCAGTCATCAGTTGCTGAGCCCCCCAACCATTTGGAGATAGGGTTTAATCAGCCTATGATCTGTGCACCATATCCCTGTATGGATCAGTTTTGTGGGCTCGTCTCAGCTTATGGACCTCAAATTCCGGGACGTGTAATGCTTCCGCTTAACATGGCTTCTGATGATGGACCAACCTACGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCAGGCAGTCACGCGCTAAGGCAGTTCTTGAGAATAAAATGGTTAAACGTCGCAAGCCTTACATGCATGAATCACGCCATCTGCATGCAATGAGGAGACCAAGAGGAAATGGTGGTCGCTTCTTGAACACAAAAAACTCCAGCAATGAAAATGGTGGAAATGATCTTGAAGGGAATCAAATGGGTGGCCTACAATTTCTGTCTAGTGCCTCTCAGAGTTCTGAAATGATGCAATCTGATGTTGGAATGCATTCACCAATGGAGACAGATCAATACAGTCCAAACATGTCTAGTTCAGAAGTGAGTAGCATGTATTCAAGGGAAGGTTTCGATGGCTTTTCTGTGAATCCTCTTGGATCTTCTTCTGTTCATCCTCTTGGATCTTCTGTCCATTCTATAGCAGACATGATAGGTAGTGGAAATGGTATCACCATGCCCACTAGATGGGCTTAA 1008 0.4385 MLLLILLLLLLLLLTLRIYFLSVRKIKSTVWRVKMAMQTAYLKEHEGIAHNSVGQLSSATSAPWLNGLGSQPVCGDYCGQSKPFALEFSNYVDQFAGDDCKMLGDAQNPPATLAPQSSVAEPPNHLEIGFNQPMICAPYPCMDQFCGLVSAYGPQIPGRVMLPLNMASDDGPTYVNAKQYHGIIRRRQSRAKAVLENKMVKRRKPYMHESRHLHAMRRPRGNGGRFLNTKNSSNENGGNDLEGNQMGGLQFLSSASQSSEMMQSDVGMHSPMETDQYSPNMSSSEVSSMYSREGFDGFSVNPLGSSSVHPLGSSVHSIADMIGSGNGITMPTRWA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04144 335 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 172 226 IPR001289 GO:0003700|GO:0006355
Phac7g04144 335 MobiDBLite consensus disorder prediction 217 241 - -
Phac7g04144 335 ProSiteProfiles NF-YA/HAP2 family profile. 169 229 IPR001289 GO:0003700|GO:0006355
Phac7g04144 335 PRINTS CCAAT-binding transcription factor subunit B signature 203 226 IPR001289 GO:0003700|GO:0006355
Phac7g04144 335 PRINTS CCAAT-binding transcription factor subunit B signature 172 194 IPR001289 GO:0003700|GO:0006355
Phac7g04144 335 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 83 299 IPR001289 GO:0003700|GO:0006355
Phac7g04144 335 Gene3D - 170 230 - -
Phac7g04144 335 MobiDBLite consensus disorder prediction 225 241 - -
Phac7g04144 335 SMART cbf3 168 229 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04144 Phac-Chr7 41337069 41342535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04144 31 334 CCAAT-HAP2 Transcription Factor Family AT3G05690 40.061 2.59e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Phac7g04144 CBFB_NFYA 6.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04144 K08064 - gmx:100808195 407.527