Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04142 ATGGCTATGCAAACTGCTTACCTGAAAGAACACGAAGGAATTGCTCACAATTCTGTTGGACAATTGTCATCTGCAACTTCAGCTCCATGGTTGAATGGCTTAGGATCTCAACCAGTCTGTGGGGATTATTGTGGCCAAAGCAAGCCCTTTGCTTTGGAGTTTTCCAACTATGTCGACCAATTTGCTGGTGGTAAGCAAACAGCACGAGGACATGCAAACCAGTTTTCCATCTTTTCTGATGACTGTAAAATGTTGGGCGATGCCCAAAATCCTCCGGCAACCTTAGCACCGCAGTCATCAGTTGCTGAGCCCCCCAACCATTTGGAGATAGGGTTTAATCAGCCTATGATCTGTGCACCATATCCCTGTATGGATCAGTTTTGTGGGCTCGTCTCAGCTTATGGACCTCAAATTCCGGGACGTGTAATGCTTCCGCTTAACATGGCTTCTGATGATGGACCAACCTACGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCAGGCAGTCACGCGCTAAGGCAGTTCTTGAGAATAAAATGGTTAAACGTCGCAAGCCTTACATGCATGAATCACGCCATCTGCATGCAATGAGGAGACCAAGAGGAAATGGTGGTCGCTTCTTGAACACAAAAAACTCCAGCAATGAAAATGGTGGAAATGATCTTGAAGGGAATCAAATGGGTGGCCTACAATTTCTGTCTAGTGCCTCTCAGAGTTCTGAAATGATGCAATCTGATGTTGGAATGCATTCACCAATGGAGACAGATCAATACAGTCCAAACATGTCTAGTTCAGAAGTGAGTAGCATGTATTCAAGGGAAGGTTTCGATGGCTTTTCTGTGAATCCTCTTGGATCTTCTTCTGTTCATCCTCTTGGATCTTCTGTCCATTCTATAGCAGACATGATAGGTAGTGGAAATGGTATCACCATGCCCACTAGATGGGCTTAA 954 0.4507 MAMQTAYLKEHEGIAHNSVGQLSSATSAPWLNGLGSQPVCGDYCGQSKPFALEFSNYVDQFAGGKQTARGHANQFSIFSDDCKMLGDAQNPPATLAPQSSVAEPPNHLEIGFNQPMICAPYPCMDQFCGLVSAYGPQIPGRVMLPLNMASDDGPTYVNAKQYHGIIRRRQSRAKAVLENKMVKRRKPYMHESRHLHAMRRPRGNGGRFLNTKNSSNENGGNDLEGNQMGGLQFLSSASQSSEMMQSDVGMHSPMETDQYSPNMSSSEVSSMYSREGFDGFSVNPLGSSSVHPLGSSVHSIADMIGSGNGITMPTRWA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04142 317 MobiDBLite consensus disorder prediction 199 223 - -
Phac7g04142 317 Gene3D - 152 212 - -
Phac7g04142 317 PRINTS CCAAT-binding transcription factor subunit B signature 154 176 IPR001289 GO:0003700|GO:0006355
Phac7g04142 317 PRINTS CCAAT-binding transcription factor subunit B signature 185 208 IPR001289 GO:0003700|GO:0006355
Phac7g04142 317 MobiDBLite consensus disorder prediction 207 223 - -
Phac7g04142 317 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 154 208 IPR001289 GO:0003700|GO:0006355
Phac7g04142 317 ProSiteProfiles NF-YA/HAP2 family profile. 151 211 IPR001289 GO:0003700|GO:0006355
Phac7g04142 317 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 63 281 IPR001289 GO:0003700|GO:0006355
Phac7g04142 317 SMART cbf3 150 211 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04142 Phac-Chr7 41337069 41342535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04142 1 316 CCAAT-HAP2 Transcription Factor Family AT3G05690 39.039 1.94e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Phac7g04142 CBFB_NFYA 5.7e-25 No_clan