Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04129 ATGGGAAACAGCTGTGTTGGATCGAGAACCTCTGCTGCTAATAACGGAACTCGTGGCTCCTCTGTTCCTAGTCCATACTGGTGGTGTTGTGGATACAAATATGGTTCTCATACGTGCAAATGTGACAAAACGAACACAAAAGACACAGAAACTATTCAAGACATGCCTCCACAGATAGTGAGAATTGAGAGTGATGAGGTGAAGCCTCCTCATCGATACAAAGAGGAGAAGCCACCTTCGGAACAAACAAGGCCGCAGCCCAGGCCACAGCCCAGGCCACACAATGTGAAGAAGCCGGCAAGTGCAGGGCTCAAAGCAGATTCTGTTCTGCAAAGGAAAACCGGTAACCTTAAGGAGTTTTACAATTTGGGACCAAAGCTTGGACAGGGCCAGTTTGGAACTACTTTCCTCTGTGTGGAGAAAGCCACTGGGAAAGAGTATGCATGCAAGTCCATATTGAAGAGGAAGCTGATGACAGAGGAGGATGTGGAGGATGTGAGGAGGGAAATTCAGATAATGCACCACTTGGCAGGGAGTGCTAATGTGATCTCAATCAAGGAGGCTTTTGAGGATGCTGTTTCAGTTCATGTTGTTATGGAGCTGTGTGCTGGGGGTGAGCTGTTTGATAGGATTGTGGAAAGAGGGCATTACAGTGAGAGAAAGGCAGCCAAGCTTGCAAGAACAATAGTTGGTGTCATTGAGTCTTGCCACTCTCTTGGAGTGATGCATAGGGATCTTAAGCCCGAGAATTTTCTCTTTGTTAATCAGCAAGAAGAATCCCCTCTCAAGGCAATAGATTTTGGACTTTCTGCTTTTTTCAAACCAGGTGAAATTTTCAGTGACGTAGTAGGAAGTCCCTATTATGTAGCACCTGAAGTTCTTCGCAAGCGTTATGGCCCCGAAGCAGATGTATGGAGTGCTGGTGTCATTATATACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGGAGAAACGGAACAAGAGATATTCGACGCAATTTTGCGTTTTCAACTCGATTTCTCATCGGATCCATGGCCTTCCATATCAGCAAGTGCAAAAGACTTGGTTAGGAAGATGCTTGTCAGAGACCCTAGTAAACGGATAACAGCTTTTGATGTTCTTCGTCACCCCTGGATTCAAGTTGATGGAGAAGCTCCTGACAAGCCCCTTGATTCTGCAGTTTTAAGTCGCCTAAAGCAGTTTTATGCAATGAACAAACTCAAGAAAATGGCTCTCAGAGTTATAGCAGAGAATCTCTCTGAAGAAGAAATTGCAGGGTTGAAAGAAATGTTTAAGATGATAGACTCAGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAGATTGGACTGAAAAAGTTTGGTGCTAATCTCAATGAATCTGAAATTTACGACCTTATGCAAGCAGCAGATGTTGATAACAGTGGCACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATCTAAACAAGATTGAAAGAGAAGATCATTTAGTTGCAGCTTTTGCTTATTTTGATAAAGATGGTAGTGGCTACATCACTCAAGACGAGCTTCAAAAAGCTTGCGAAGAATTTGGCATTGGAGATGTTCGATTGGAGGAAATGATGCGAGAAGCTGATCAAGATAACGATGGACGAATAGACTACAATGAATTTGTGGCTATGATGCAGAAAGGTAATGCAGATTTGGGTAAGAGGGGTCGAAAGGGTAGCACTAGTTTTAGAATTGGATTTAGGGAGGCACTACCTGTGTGA 1758 0.4346 MGNSCVGSRTSAANNGTRGSSVPSPYWWCCGYKYGSHTCKCDKTNTKDTETIQDMPPQIVRIESDEVKPPHRYKEEKPPSEQTRPQPRPQPRPHNVKKPASAGLKADSVLQRKTGNLKEFYNLGPKLGQGQFGTTFLCVEKATGKEYACKSILKRKLMTEEDVEDVRREIQIMHHLAGSANVISIKEAFEDAVSVHVVMELCAGGELFDRIVERGHYSERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNQQEESPLKAIDFGLSAFFKPGEIFSDVVGSPYYVAPEVLRKRYGPEADVWSAGVIIYILLSGVPPFWGETEQEIFDAILRFQLDFSSDPWPSISASAKDLVRKMLVRDPSKRITAFDVLRHPWIQVDGEAPDKPLDSAVLSRLKQFYAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDSDNSGQITFEELKIGLKKFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKIEREDHLVAAFAYFDKDGSGYITQDELQKACEEFGIGDVRLEEMMREADQDNDGRIDYNEFVAMMQKGNADLGKRGRKGSTSFRIGFREALPV* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04129 585 FunFam Calcium-dependent protein kinase SK5 207 391 - -
Phac7g04129 585 ProSiteProfiles EF-hand calcium-binding domain profile. 532 563 IPR002048 GO:0005509
Phac7g04129 585 MobiDBLite consensus disorder prediction 47 108 - -
Phac7g04129 585 ProSitePatterns EF-hand calcium-binding domain. 541 553 IPR018247 -
Phac7g04129 585 ProSitePatterns Protein kinases ATP-binding region signature. 127 154 IPR017441 GO:0005524
Phac7g04129 585 SMART efh_1 498 526 IPR002048 GO:0005509
Phac7g04129 585 SMART efh_1 532 560 IPR002048 GO:0005509
Phac7g04129 585 SMART efh_1 426 454 IPR002048 GO:0005509
Phac7g04129 585 SMART efh_1 462 490 IPR002048 GO:0005509
Phac7g04129 585 SUPERFAMILY Protein kinase-like (PK-like) 121 380 IPR011009 -
Phac7g04129 585 SMART serkin_6 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04129 585 MobiDBLite consensus disorder prediction 64 82 - -
Phac7g04129 585 Gene3D Transferase(Phosphotransferase) domain 1 207 403 - -
Phac7g04129 585 CDD EFh 498 558 IPR002048 GO:0005509
Phac7g04129 585 CDD STKc_CAMK 120 378 - -
Phac7g04129 585 MobiDBLite consensus disorder prediction 1 21 - -
Phac7g04129 585 ProSitePatterns EF-hand calcium-binding domain. 507 519 IPR018247 -
Phac7g04129 585 Pfam EF-hand domain pair 499 558 IPR002048 GO:0005509
Phac7g04129 585 Pfam EF-hand domain pair 427 487 IPR002048 GO:0005509
Phac7g04129 585 Gene3D Phosphorylase Kinase; domain 1 124 206 - -
Phac7g04129 585 ProSiteProfiles EF-hand calcium-binding domain profile. 494 529 IPR002048 GO:0005509
Phac7g04129 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 111 553 - -
Phac7g04129 585 Gene3D - 404 563 - -
Phac7g04129 585 FunFam Calcium-dependent protein kinase 1 387 561 - -
Phac7g04129 585 Pfam Protein kinase domain 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04129 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Phac7g04129 585 SUPERFAMILY EF-hand 418 559 IPR011992 -
Phac7g04129 585 ProSitePatterns EF-hand calcium-binding domain. 471 483 IPR018247 -
Phac7g04129 585 ProSiteProfiles EF-hand calcium-binding domain profile. 422 457 IPR002048 GO:0005509
Phac7g04129 585 FunFam Calcium-dependent protein kinase 1 123 206 - -
Phac7g04129 585 ProSiteProfiles Protein kinase domain profile. 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04129 585 ProSiteProfiles EF-hand calcium-binding domain profile. 458 493 IPR002048 GO:0005509
Phac7g04129 585 CDD EFh 427 486 IPR002048 GO:0005509
Phac7g04129 585 ProSitePatterns EF-hand calcium-binding domain. 435 447 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04129 Phac-Chr7 41246616 41251708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04129 50 577 EF-hand Containing Proteins AT3G10660 73.519 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac7g04129 Pkinase 4.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04129 K13412 - gmx:100783079 1006.51