Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04117 ATGGGCAACAACTGCGTGGGACCGAACGTCGGTAACGGCTTCATCCAGTCCGTTACGGCGGCGGTGTGGAAGACGCGCCCGCCGGAGTCCCGCCTTCCGCCGCCTTCCGCTGAGACCAAAACCTCGACTCCGGTACCGAAATCCGAGAAAGAGTCGGAACCCGCGCCTTCCCAATCCTCGGATCCTCCGTTGCGGGTGCAGAACACGCCGCCAGAGCATGTGAAAATGCCCGCCTCGGCGGAGGCGAAGCCGGTTCCGCTGGATCACGAGAAGCCGGCGTCGAGCCATGCCGAGCCGGCTGCCGGCGACAAGGAGAAGAAACCCACTCATGTGAAACGGATGTCCAGTATGGGACTTCAAGTGGACTCGGTGCTGGGTCGAAAAACAGAGAACATGAAGGAGTTCTTCAGCTTGGGGAGGAAGCTGGGGCAGGGGCAATTCGGGACGACGTTTCTGTGCGTGCAAAAGGGGACGAACAAGGATTTCGCGTGCAAGTCCATCGCGAAGCGGAAATTGACGACGCAGGAGGATGTGGAGGATGTGAGGAGGGAGATTCAGATCATGCACCACTTGGCGGGGCACCCAAACGTGATTCAGATCGTTGGGGCTTACGAGGACGCCGTTGCGGTGCACGTTGTAATGCAGCTCTGCGCTGGGGGGGAGCTCTTTGACAGGATCATACAGAGGGGGCATTACACCGAGAAGAAGGCCGCGGAACTTGCTAGGTTGATTGTTAGTGTGGTGGAGGCTTGTCACTCTCTTGGGGTCATGCACAGGGATTTAAAGCCCGAGAATTTTTTGTTCGTTAATCAGGAGGAAGAGTCTCCCCTTAAGACCATTGATTTTGGACTCTCCGTGTTCTTTAGACCAGGTGAAACATTCACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCTGAAGTCTTGCGGAAGAACTATGGTCCAGAATGTGATGTTTGGAGTGCTGGGGTGATCATCTATATTTTACTCAGTGGAGTTCCCCCATTTTGGGATGAAACGGAACAGGGAATATTTGAGCAAGTTTTGAAAGGAGAGCTTGACTTTGTTTCTGAACCCTGGCCAAGCATATCTGAAAGCGCAAAAGATCTTGTTCGAAGGATGCTTGTAAGGGACCCTAAGAAACGGCTGACAGCACATGAAGTTCTTTGCCACCCATGGGTGCAAGTCGGAGGCGTTGCTCCTGATAAACCACTTGATTCTGCTGTTTTGTCTCGTTTGAAGCAGTTCTCTGCAATGAACAAACTCAAAAAAATAGCCATTCGAGTAATTGCTGAAAGTTTGTCCGAGGAAGAAATTGCAGGACTAAAAGAAATGTTCAGGATGATAGACTCAGATAATAGCGGACAGATCACTGTTGAGGAATTGAAAAATGGTTTGGAGAGAGTGGGTTCTGTTCTTAAGGATTCTGAGATTGCTTGGTTAATGCAAGCGGCAGACGTTGATAACAGTGGTACCATAGACTATGGTGAATTCATAGCAGCTATGCTACACCTAAACAAGATCCAGAAGGAAGATCATCTATACGCAGCATTCACATACTTTGACAAAGATGGGAGTGGATACATTACACACGATGAGCTCCAACAAGCCTGCGAACAGTATGGCTTGCAGGATCATCACCTGGATGAGATAATACGTGAAATTGACCAGGATAATGATGGACGCATTGATTACAGTGAGTTTGTAGCTATGATGCAAGACACTGGTTTTGGCAAAAAGGGATTATAG 1749 0.5026 MGNNCVGPNVGNGFIQSVTAAVWKTRPPESRLPPPSAETKTSTPVPKSEKESEPAPSQSSDPPLRVQNTPPEHVKMPASAEAKPVPLDHEKPASSHAEPAAGDKEKKPTHVKRMSSMGLQVDSVLGRKTENMKEFFSLGRKLGQGQFGTTFLCVQKGTNKDFACKSIAKRKLTTQEDVEDVRREIQIMHHLAGHPNVIQIVGAYEDAVAVHVVMQLCAGGELFDRIIQRGHYTEKKAAELARLIVSVVEACHSLGVMHRDLKPENFLFVNQEEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKNYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFVSEPWPSISESAKDLVRRMLVRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAESLSEEEIAGLKEMFRMIDSDNSGQITVEELKNGLERVGSVLKDSEIAWLMQAADVDNSGTIDYGEFIAAMLHLNKIQKEDHLYAAFTYFDKDGSGYITHDELQQACEQYGLQDHHLDEIIREIDQDNDGRIDYSEFVAMMQDTGFGKKGL* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04117 582 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Phac7g04117 582 CDD STKc_CAMK 135 393 - -
Phac7g04117 582 Gene3D Transferase(Phosphotransferase) domain 1 222 398 - -
Phac7g04117 582 ProSiteProfiles EF-hand calcium-binding domain profile. 543 578 IPR002048 GO:0005509
Phac7g04117 582 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Phac7g04117 582 ProSiteProfiles Protein kinase domain profile. 136 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04117 582 MobiDBLite consensus disorder prediction 21 113 - -
Phac7g04117 582 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Phac7g04117 582 SUPERFAMILY Protein kinase-like (PK-like) 136 395 IPR011009 -
Phac7g04117 582 Pfam EF-hand domain pair 442 502 IPR002048 GO:0005509
Phac7g04117 582 Pfam EF-hand domain pair 512 573 IPR002048 GO:0005509
Phac7g04117 582 SMART serkin_6 136 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04117 582 Gene3D - 410 503 - -
Phac7g04117 582 Gene3D Phosphorylase Kinase; domain 1 138 221 - -
Phac7g04117 582 MobiDBLite consensus disorder prediction 84 112 - -
Phac7g04117 582 SUPERFAMILY EF-hand 434 573 IPR011992 -
Phac7g04117 582 FunFam Calcium-dependent protein kinase 1 138 221 - -
Phac7g04117 582 ProSitePatterns Protein kinases ATP-binding region signature. 142 169 IPR017441 GO:0005524
Phac7g04117 582 SMART efh_1 547 575 IPR002048 GO:0005509
Phac7g04117 582 SMART efh_1 513 541 IPR002048 GO:0005509
Phac7g04117 582 SMART efh_1 441 469 IPR002048 GO:0005509
Phac7g04117 582 SMART efh_1 477 505 IPR002048 GO:0005509
Phac7g04117 582 PANTHER SERINE/THREONINE-PROTEIN KINASE 128 568 - -
Phac7g04117 582 ProSiteProfiles EF-hand calcium-binding domain profile. 509 542 IPR002048 GO:0005509
Phac7g04117 582 FunFam Calcium-dependent protein kinase SK5 222 406 - -
Phac7g04117 582 Pfam Protein kinase domain 137 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04117 582 Gene3D - 420 572 - -
Phac7g04117 582 ProSitePatterns EF-hand calcium-binding domain. 486 498 IPR018247 -
Phac7g04117 582 FunFam Calcium-dependent protein kinase 1 402 576 - -
Phac7g04117 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Phac7g04117 582 ProSitePatterns EF-hand calcium-binding domain. 556 568 IPR018247 -
Phac7g04117 582 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04117 Phac-Chr7 41148449 41155016 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04117 1 582 EF-hand Containing Proteins AT2G38910 74.829 0.0 905
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phac7g04117 Pkinase 5.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04117 K13412 - gmx:100813232 1022.31