Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04097 ATGGATGATGTTGACAGTGACGACAATGACGAGGAGTTTGACAGTGATGAAAATGATAATGAAGAAACCCTTCCTAAAAAGGTGGATTTAGAAAAGAAAAGACCAACTGAGTCTGCGTCAAAAACTCTTGTTTCCTCCAAGAAAGCAAAAAATGCTTCTTTAGAAAAGACTGATGGTAAGAAAACAGGAAATGCAGGAACTCCACATTCCGTGAAGAAAGGTGGAAAGACTCCCAATAGTGAAAAGCCAAGAGTCCCAAGTCTGGTGAACTCAATTGCAAAAGTTGCAGCAAGACTTTCAACTCTAATAGCGACATGCAACAACATAACAAGGCAAAGCACGGGTGCTAAGGTTAAGGTTGGAGAGTCTGTTAAGGTAGACCCAATTGAATTTGAGGCATGCATACACCTTTCTCAGGCTGCTCTTGGTGAGGCAAAGAAGGAAAAACCAAATGAGCTTGTGGTTGTGTGCTTGAAGGTTGGTGAGCAGAAGTTTGTCCTGGGAACCCTCTCCAGGGAGAAAATTCCTCAAATTTATCTGGAATTGGCTTATTACTTTGGCGATGATAATGAGGAGCATGAATTTACTAATAGTGATGAAGATATCCCATTGATAGATGCCAAAGCTAGTGCTTTAGCAAAAAAAGTCAAGGTTGTTGAGCCAAAGAAAGACAACGAGGACTCTGATGATGATTCTGATGAAGAGATGAATGATGCTGACAGTGACGACAGTGACAAGGATTCTGACAAAAAGGCTAATGTTAAGAAAACAGGAAATGCAGGAACTCCACACTCCGTGAAGAAAGGTGGAAAGACTCCCAATAGTGAAGCCAAGAGTACCAAGTCCGATGGACTCAGTTGCAAAAGGTGCAACAAGACTTTCAACTCCGATAGTGGTTTGCAACAACATAACAAGACAAAGCACGGTGGTCAGTGA 936 0.4177 MDDVDSDDNDEEFDSDENDNEETLPKKVDLEKKRPTESASKTLVSSKKAKNASLEKTDGKKTGNAGTPHSVKKGGKTPNSEKPRVPSLVNSIAKVAARLSTLIATCNNITRQSTGAKVKVGESVKVDPIEFEACIHLSQAALGEAKKEKPNELVVVCLKVGEQKFVLGTLSREKIPQIYLELAYYFGDDNEEHEFTNSDEDIPLIDAKASALAKKVKVVEPKKDNEDSDDDSDEEMNDADSDDSDKDSDKKANVKKTGNAGTPHSVKKGGKTPNSEAKSTKSDGLSCKRCNKTFNSDSGLQQHNKTKHGGQ* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04097 311 ProSiteProfiles Zinc finger C2H2 type domain profile. 285 311 IPR013087 -
Phac7g04097 311 MobiDBLite consensus disorder prediction 226 242 - -
Phac7g04097 311 MobiDBLite consensus disorder prediction 20 38 - -
Phac7g04097 311 Pfam Nucleoplasmin-like domain 115 183 IPR041232 -
Phac7g04097 311 MobiDBLite consensus disorder prediction 1 87 - -
Phac7g04097 311 MobiDBLite consensus disorder prediction 215 311 - -
Phac7g04097 311 SUPERFAMILY beta-beta-alpha zinc fingers 278 307 IPR036236 -
Phac7g04097 311 MobiDBLite consensus disorder prediction 1 19 - -
Phac7g04097 311 MobiDBLite consensus disorder prediction 268 311 - -
Phac7g04097 311 ProSitePatterns Zinc finger C2H2 type domain signature. 287 308 IPR013087 -
Phac7g04097 311 Gene3D Nucleoplasmin core domain 107 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04097 Phac-Chr7 41055341 41057740 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04097 115 184 C2H2 Transcription Factor Family AT3G44750 50.000 9.12e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g04097 NPL 1.4e-06 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04097 - - gmx:100795506 177.563