Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04085 ATGGAATTGCCTACAGCTAATGTGGATCTTGGGCCTAAGAAGATTGAACATGAGAAAGAGGAAGGTCCCTTGTTACATTGTGATTTTTGTGACATAGAAGTTGTTCACAATCTGGCTCAAATGTTCATGCCAGGACTAGCCTGTGCCTGTGTTGATAACACAACAGGAGATCCCTTCAATACCCCTGGTTTTGTGGCTGTTGATATGAGAAAGGAGATGATAGAATTTGTCACCCAAAAGAGTGAATTATTTGTTGCTGAGTCTATTATCTCTGAGGGTGGTCCTGATGGTGAAGCTTTGGAACACCCTTTTGATATTATTTCTTATTTTGTTGACGAGTTTGTTAATTCAAAGAGGAATTTGTGGAGCCAGTTTTCAGGGTGGTTGCTAAGTGACAAGAGAGAGGACAAAATAGATGATTTTATTCAGGAGATGGAAGTAAATGGTTTTTGGCCACTGGATAGAAGAGAAACACTTGCAAAAGATTTGCTCAAGAATGTTGACTTCAAGAGCTCATTTCATTGCAGTATGAGTTTTAACTCTGCCGAAGATCTTGCCAACCATGTTGATGCATGCGACTTCAGGACTGTGATATGCCAAAATGAGGGGTGCAATGTCAGATTCAGTGCTGGTCAATTGAAAGAGCATGATTCAACTTGTGATTTCAAGATAGTTCCATGTGAACAGAAGTGCACAGCTAACATCTTGAGACGTGAGATGGATAGACACTGCCTAACTGTTTGTCCACTAAAGCTTGTGAATTGCCCTTTCTCTGCCATAGGCTGTAGATCTACAACTGCACAAAGTATGATTAGAAAACATTGTTCAGATGATATTGAGTCTCACTTATTCCTAATGCTTAAAGGCATCCACCAGCCAGCGTCAAGCGAAGATCTTCAAAGACGAGTGGAGCAAATTGTACAGGTTAGTCAACAACACAAAAGCTTTTTGCTTTTGGTTAGCAAACAAATTATGGGACTGAAATCCGGTACTGATAATTTTTTATTTAAAATTTTTCAACCAGTAAATTTTGTGCTTCAAAACATTATAAATACTTGA 1059 0.39 MELPTANVDLGPKKIEHEKEEGPLLHCDFCDIEVVHNLAQMFMPGLACACVDNTTGDPFNTPGFVAVDMRKEMIEFVTQKSELFVAESIISEGGPDGEALEHPFDIISYFVDEFVNSKRNLWSQFSGWLLSDKREDKIDDFIQEMEVNGFWPLDRRETLAKDLLKNVDFKSSFHCSMSFNSAEDLANHVDACDFRTVICQNEGCNVRFSAGQLKEHDSTCDFKIVPCEQKCTANILRREMDRHCLTVCPLKLVNCPFSAIGCRSTTAQSMIRKHCSDDIESHLFLMLKGIHQPASSEDLQRRVEQIVQVSQQHKSFLLLVSKQIMGLKSGTDNFLFKIFQPVNFVLQNIINT* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04085 352 SUPERFAMILY TRAF domain-like 183 225 - -
Phac7g04085 352 SUPERFAMILY TRAF domain-like 227 338 - -
Phac7g04085 352 Pfam TRAF-type zinc finger 216 274 IPR001293 GO:0008270
Phac7g04085 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 219 280 IPR013083 -
Phac7g04085 352 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 168 218 IPR013083 -
Phac7g04085 352 ProSiteProfiles Zinc finger TRAF-type profile. 216 263 IPR001293 GO:0008270
Phac7g04085 352 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 24 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04085 Phac-Chr7 40955420 40959584 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac7g04085 zf-TRAF 4.5e-11 CL0389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04085 - - vra:106769987 577.015