Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04047 ATGGAACTGGCTTTGAGCTTAGGAGACACTTCCAAGTCCTTTGCTTTTCTCGACAAGCCTGTAAATTTACCCTCCAAGGACCCACCTGGGTTCTGCATAGCTCCGGGGAAAGGCTTTGAAGACAAAAGAACCGATGCTGAGAAAAGGGGTTCTTCAGATCCACCAGTTCAACTTGATCTTCTTCCTTTCACTCCCGTTCTCAGATCCCAACCTCCTTCCCAGCTTCGAATCCCTTGGCTCACTGAACCATGTGGAGCGGCGAGGGTGCTGGATGTAAATCTTTTTCCGTCGGCTGCCGAGGACGGCGATGACGGGACGTCGCTGTCGTCGCCGAGCAGTGCAGTGTCGCCGTTTCAGATGGATTTCAGCATAAGAAACGGTAATGCAGAGTTTGGAGGAAGAAACAAGAGGGAACAACAAGAGGGTGAAGGTACAAGAGTGAGCGATGACGAGGAAAATGGCTCGACTCGGAAGAAACTCAGACTCTCCAAAGAACAATCAGCTTTTCTGGAAGAAAGCTTCAAAGAACACACCACTCTCAATCCAAAGCAGAAACTTGCTCTGGCTAAACAGTTGAATCTCCTTCCTCGTCAAGTGGAGGTTTGGTTTCAGAACAGGAGGGCAAGAACAAAGTTGAAGCAAACAGAAGTGGATTGTGAGTATTTGAAGAGATGCTGTGAGACTCTAACAGAAGAGAATAGAAGGTTGCAGAAGGAGCTTCAAGAACTAAGAGCCTTGAAAACTTCTCAACCATTCTACATGCAGCTTCCAGCCACCACTCTCACCATGTGTCCCTCTTGTGAAAGGGTTGCCACAAATTCCACAACCACTAACCAAACTTCTTCCACCATTAACAACAATGCTTCTCAAATCCCTGTGGAGTTATCTCTAAGCAAGCCCAGAATACTGCCCTTCCCAAATGGGCAGGCCCAGGCAACCCAGGCCCAAGCCCAAACTCAAGCCCATCGGATAGCTTCTTCGTGA 984 0.4848 MELALSLGDTSKSFAFLDKPVNLPSKDPPGFCIAPGKGFEDKRTDAEKRGSSDPPVQLDLLPFTPVLRSQPPSQLRIPWLTEPCGAARVLDVNLFPSAAEDGDDGTSLSSPSSAVSPFQMDFSIRNGNAEFGGRNKREQQEGEGTRVSDDEENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNSTTTNQTSSTINNNASQIPVELSLSKPRILPFPNGQAQATQAQAQTQAHRIASS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04047 327 SMART HOX_1 155 217 IPR001356 GO:0003677
Phac7g04047 327 MobiDBLite consensus disorder prediction 27 59 - -
Phac7g04047 327 SUPERFAMILY Homeodomain-like 149 214 IPR009057 -
Phac7g04047 327 Coils Coil 219 249 - -
Phac7g04047 327 Pfam Homeobox associated leucine zipper 213 247 IPR003106 GO:0006355|GO:0043565
Phac7g04047 327 CDD bZIP 206 245 - -
Phac7g04047 327 CDD homeodomain 157 214 IPR001356 GO:0003677
Phac7g04047 327 SMART halz 213 256 IPR003106 GO:0006355|GO:0043565
Phac7g04047 327 MobiDBLite consensus disorder prediction 38 52 - -
Phac7g04047 327 FunFam Homeobox-leucine zipper protein 18 143 218 - -
Phac7g04047 327 ProSiteProfiles 'Homeobox' domain profile. 153 213 IPR001356 GO:0003677
Phac7g04047 327 MobiDBLite consensus disorder prediction 103 119 - -
Phac7g04047 327 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 53 288 - -
Phac7g04047 327 Pfam Homeodomain 157 211 IPR001356 GO:0003677
Phac7g04047 327 Gene3D - 161 211 - -
Phac7g04047 327 MobiDBLite consensus disorder prediction 131 162 - -
Phac7g04047 327 ProSitePatterns 'Homeobox' domain signature. 188 211 IPR017970 GO:0000981|GO:0006355
Phac7g04047 327 MobiDBLite consensus disorder prediction 125 162 - -
Phac7g04047 327 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04047 Phac-Chr7 40741729 40743976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04047 55 279 Homeobox Transcription Factor Family AT5G47370 55.508 2.29e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac7g04047 Homeodomain 5.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04047 K09338 - gmx:100776113 490.73