Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac7g04047 | ATGGAACTGGCTTTGAGCTTAGGAGACACTTCCAAGTCCTTTGCTTTTCTCGACAAGCCTGTAAATTTACCCTCCAAGGACCCACCTGGGTTCTGCATAGCTCCGGGGAAAGGCTTTGAAGACAAAAGAACCGATGCTGAGAAAAGGGGTTCTTCAGATCCACCAGTTCAACTTGATCTTCTTCCTTTCACTCCCGTTCTCAGATCCCAACCTCCTTCCCAGCTTCGAATCCCTTGGCTCACTGAACCATGTGGAGCGGCGAGGGTGCTGGATGTAAATCTTTTTCCGTCGGCTGCCGAGGACGGCGATGACGGGACGTCGCTGTCGTCGCCGAGCAGTGCAGTGTCGCCGTTTCAGATGGATTTCAGCATAAGAAACGGTAATGCAGAGTTTGGAGGAAGAAACAAGAGGGAACAACAAGAGGGTGAAGGTACAAGAGTGAGCGATGACGAGGAAAATGGCTCGACTCGGAAGAAACTCAGACTCTCCAAAGAACAATCAGCTTTTCTGGAAGAAAGCTTCAAAGAACACACCACTCTCAATCCAAAGCAGAAACTTGCTCTGGCTAAACAGTTGAATCTCCTTCCTCGTCAAGTGGAGGTTTGGTTTCAGAACAGGAGGGCAAGAACAAAGTTGAAGCAAACAGAAGTGGATTGTGAGTATTTGAAGAGATGCTGTGAGACTCTAACAGAAGAGAATAGAAGGTTGCAGAAGGAGCTTCAAGAACTAAGAGCCTTGAAAACTTCTCAACCATTCTACATGCAGCTTCCAGCCACCACTCTCACCATGTGTCCCTCTTGTGAAAGGGTTGCCACAAATTCCACAACCACTAACCAAACTTCTTCCACCATTAACAACAATGCTTCTCAAATCCCTGTGGAGTTATCTCTAAGCAAGCCCAGAATACTGCCCTTCCCAAATGGGCAGGCCCAGGCAACCCAGGCCCAAGCCCAAACTCAAGCCCATCGGATAGCTTCTTCGTGA | 984 | 0.4848 | MELALSLGDTSKSFAFLDKPVNLPSKDPPGFCIAPGKGFEDKRTDAEKRGSSDPPVQLDLLPFTPVLRSQPPSQLRIPWLTEPCGAARVLDVNLFPSAAEDGDDGTSLSSPSSAVSPFQMDFSIRNGNAEFGGRNKREQQEGEGTRVSDDEENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNSTTTNQTSSTINNNASQIPVELSLSKPRILPFPNGQAQATQAQAQTQAHRIASS* | 328 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac7g04047 | 327 | SMART | HOX_1 | 155 | 217 | IPR001356 | GO:0003677 | |
Phac7g04047 | 327 | MobiDBLite | consensus disorder prediction | 27 | 59 | - | - | |
Phac7g04047 | 327 | SUPERFAMILY | Homeodomain-like | 149 | 214 | IPR009057 | - | |
Phac7g04047 | 327 | Coils | Coil | 219 | 249 | - | - | |
Phac7g04047 | 327 | Pfam | Homeobox associated leucine zipper | 213 | 247 | IPR003106 | GO:0006355|GO:0043565 | |
Phac7g04047 | 327 | CDD | bZIP | 206 | 245 | - | - | |
Phac7g04047 | 327 | CDD | homeodomain | 157 | 214 | IPR001356 | GO:0003677 | |
Phac7g04047 | 327 | SMART | halz | 213 | 256 | IPR003106 | GO:0006355|GO:0043565 | |
Phac7g04047 | 327 | MobiDBLite | consensus disorder prediction | 38 | 52 | - | - | |
Phac7g04047 | 327 | FunFam | Homeobox-leucine zipper protein 18 | 143 | 218 | - | - | |
Phac7g04047 | 327 | ProSiteProfiles | 'Homeobox' domain profile. | 153 | 213 | IPR001356 | GO:0003677 | |
Phac7g04047 | 327 | MobiDBLite | consensus disorder prediction | 103 | 119 | - | - | |
Phac7g04047 | 327 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 53 | 288 | - | - | |
Phac7g04047 | 327 | Pfam | Homeodomain | 157 | 211 | IPR001356 | GO:0003677 | |
Phac7g04047 | 327 | Gene3D | - | 161 | 211 | - | - | |
Phac7g04047 | 327 | MobiDBLite | consensus disorder prediction | 131 | 162 | - | - | |
Phac7g04047 | 327 | ProSitePatterns | 'Homeobox' domain signature. | 188 | 211 | IPR017970 | GO:0000981|GO:0006355 | |
Phac7g04047 | 327 | MobiDBLite | consensus disorder prediction | 125 | 162 | - | - | |
Phac7g04047 | 327 | MobiDBLite | consensus disorder prediction | 100 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac7g04047 | Phac-Chr7 | 40741729 | 40743976 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac7g04047 | 55 | 279 | Homeobox Transcription Factor Family | AT5G47370 | 55.508 | 2.29e-70 | 218 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Phac7g04047 | Homeodomain | 5.4e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac7g04047 | K09338 | - | gmx:100776113 | 490.73 |