Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04042 ATGCAGCTCCCTTGGTTAGCCAAACATGAACTAGCAGCAACCATGTTCATCATCTTATCTCTTACCAAAGTTACCAGCAACCTTGATTTCAATTTCCCTTCCTTCCAACTAGAGGATGAAGCTGATTTATTGCTCAACGACAACTCAAAAATCTACTTAGAAGCCATTCAAGTGACCCCTGATATTCGTGGTCCTATCACAAACTATTCTGGCAGGGTCTTCTATAGAGAACAACTGAAGTTAAGGGACAGCCAAAGAGGCACGAAAACTTCATTCAATTCAACTTTTGTTTTCAGCATTACTGCTGTAACCTCTCCTGGTGGTGAGGGATTTGCTTTCATACTGACAGACGATACCTCTCTTCAACTTAACAGTGGAGGCCAATGGCTTGGTATTGTCAACTCAACAAGCACAGGGGTCACTAACATAGTTGCAGTGGAGTTCGATACAAGGAAAAGCTTCCTTGAAGATGTTGATGACAACCATGTTGGGGTGGATGTAAAGAACATCTATTCCATCAAACAAGAACCTCTTGGACCACATGGTGTTAATCTCTCTAGTGGCAACTCTATTGTTACTACTGTTTACTTTGATGCTAATCATAAGAAAATGACCATTTTTGTTTCTCCATCAGATTTGGTGTTGAGGACACCAGTGCTTGTAGTGGAGGATATTGATCTCTCCGAATATCTTCCAGAAGATGTTTTTGTGGGATTTTCAGCTTCCACGGGAGAATATACCCAGATCAACGCTGTAAGATCATGGTATTTCTCTAGCTGGAAGGATATTGAGAAGAATCCCAAAAGAAATCTGACATGGTTATGGATCTTGATTCCAATAGCTGGGGTTGGAGGAGTATGCGTGCTTGCTAGTGTGTGCTTTTGGAGAAGAAACCACATAAAGGGACAAGGGGTGGAGGAAGATATGAAAATAGAGCTTGAAATTAAAAGCTCTTCCAATGCTCCACACAAATTTCAGCTGAAGGAGCTTTTATCAGCCACAAGGAGTTTCCACTCATCAAACAAGCTTGGGAAAGGAGGATTCGGGATGGTTTATAAAGGCACCTTAAACGGCAAAGATGTTGCTGTGAAGAGGATTTCAAAGAATTCACGTCATGGTAAGCAAGATTTTATAGCAGAAATCACAACCATAGGGAATCTCAATCACAAAAATCTAGTGAAGTTAATTGGATGGTGCTACGAAAAGGGTGAGATCCTCCTTGTGTATGAGCTCATGCATAATAGGAGCTTAGACAGATTCATTTTTCCAACTTCTGGAGGCGATTCAACTCTGAATTGGGAAAAGAGGGTGGCTATTATATGTGGGGTTTCTCGGGCATTAGACTATCTTCACAATGGAAGTGATAAAAGAGTGCTGCATAGAGACATAAAACCAAGCAATGTGATGTTGGATTCAGAATTCAATGCTCGGCTTGGAGACTTTGGCTTAGCTCGCACCATTCATCTTAGTGAAAAATCTCACCACTCAACTAGAGAAATTGCTGGAACACCAGGGTATATGGCGCCAGAAAGCTTACACACCCAAAGGGCTTCAGTTGAAACTGATGTCTATGCATTTGGTATTCTGATGCTTGAAGTTGTGTGTGGGGGAAGAAAGGCTGAACACAAACAGGACCTTAGATGTTGTAACAGCATTGTGGAATGGGTTTGGGAGCTTCATGGCAGAGAAAGCATAACTGATGCTGTGGATTTGAGGCTGAATGATGATTTTGATAAGGCTGAAGCCAAGTGTGTGCTTGAGTTAGGGTTAGCATGTTGCCATCCTAATCCATATGAGAGGCCATCAATGAGAACTGTGTTGCTGGTGCTAACAGGGGAAGCATCTCCTCCCTTTGTAGCAGTTAAGCAACCTGCATTCACTTGGCCACCCACTGCTTCTGCTCTCAATGAAGAGTTCAATTTCCAAGTAACAGTATCCCAAAGTGAAGCAATAACACAACTCAAAAGTGGGAGATGA 1977 0.4213 MQLPWLAKHELAATMFIILSLTKVTSNLDFNFPSFQLEDEADLLLNDNSKIYLEAIQVTPDIRGPITNYSGRVFYREQLKLRDSQRGTKTSFNSTFVFSITAVTSPGGEGFAFILTDDTSLQLNSGGQWLGIVNSTSTGVTNIVAVEFDTRKSFLEDVDDNHVGVDVKNIYSIKQEPLGPHGVNLSSGNSIVTTVYFDANHKKMTIFVSPSDLVLRTPVLVVEDIDLSEYLPEDVFVGFSASTGEYTQINAVRSWYFSSWKDIEKNPKRNLTWLWILIPIAGVGGVCVLASVCFWRRNHIKGQGVEEDMKIELEIKSSSNAPHKFQLKELLSATRSFHSSNKLGKGGFGMVYKGTLNGKDVAVKRISKNSRHGKQDFIAEITTIGNLNHKNLVKLIGWCYEKGEILLVYELMHNRSLDRFIFPTSGGDSTLNWEKRVAIICGVSRALDYLHNGSDKRVLHRDIKPSNVMLDSEFNARLGDFGLARTIHLSEKSHHSTREIAGTPGYMAPESLHTQRASVETDVYAFGILMLEVVCGGRKAEHKQDLRCCNSIVEWVWELHGRESITDAVDLRLNDDFDKAEAKCVLELGLACCHPNPYERPSMRTVLLVLTGEASPPFVAVKQPAFTWPPTASALNEEFNFQVTVSQSEAITQLKSGR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04042 658 FunFam serine/threonine-protein kinase PBS1-like 304 411 - -
Phac7g04042 658 Pfam Protein kinase domain 337 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04042 658 CDD lectin_legume_LecRK_Arcelin_ConA 28 259 IPR001220 GO:0030246
Phac7g04042 658 FunFam Lectin-domain containing receptor kinase A4.3 412 630 - -
Phac7g04042 658 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Phac7g04042 658 CDD STKc_IRAK 343 612 - -
Phac7g04042 658 Gene3D Phosphorylase Kinase; domain 1 315 411 - -
Phac7g04042 658 PANTHER - 60 617 - -
Phac7g04042 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 259 IPR013320 -
Phac7g04042 658 Gene3D - 26 272 - -
Phac7g04042 658 Pfam Legume lectin domain 28 267 IPR001220 GO:0030246
Phac7g04042 658 ProSiteProfiles Protein kinase domain profile. 337 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04042 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Phac7g04042 658 Gene3D Transferase(Phosphotransferase) domain 1 412 616 - -
Phac7g04042 658 SMART serkin_6 337 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04042 658 SUPERFAMILY Protein kinase-like (PK-like) 318 610 IPR011009 -
Phac7g04042 658 ProSitePatterns Protein kinases ATP-binding region signature. 343 364 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04042 Phac-Chr7 40678151 40680263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04042 5 628 Receptor kinase-like Gene Family AT5G55830 35.855 4.28e-119 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac7g04042 Pkinase 1.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04042 - - tcc:108661882 722.62