Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04040 ATGCAGCTCCCTTGGTTAGTCAAATATCAATATGCAGCAACACTCTTGGTCACCATTGCCCTTACCAAAGTTACCTGTTTTCATTTCAATTTCCCTACCTTCCAACCACAGGATGAGTCTAATCTATTGCTGCACAAGAATGCAAAAATATATTTAGATGCAATCCAAGTAACCCCTGATATTCGTGGTCCTATACATAACTATTCTGGACGTGCTTTCTACAAAAAGCCATATCAACTTTGGAAACAGAAGAAGAACCAAAACCAAATAGCTTCCTTCAATACCACTTTTGTGCTCAACATAACTCCACAAACTACCCCTGGTGGTGAAGGTTTGGCCTTCATCCTAACTTCAGATACGACTCTTCCAGAAAACAGTGATGGAGAATGGCTTGGTATTGTAAATGCTACTTCCAATGGAACTTCACAAGCTGGTATTCTAGCAGTGGAGTTTGACACAAGACACAGTTTCACAGAAGATGGCCCTGACAATCATGTTGGCATCAACATAAACAGCATCAACTCCATCCAACAGGTTTCGTTACTAAACGCTCGGGTCAATCTTTCGTCAGGTCAAGATGTCAAATTTCACATTCAGTTCTTCAATGACATAATATCGGTTTTTGGTTCCATGAATGGAACTTCCGAAGATTCTATGGAGACCCTCTTGGTAACTCCACCTCTTAATATATCTTCCTTTCTTCAACAAGAGGTTTACCTTGGTTTCTCCGGCTCAACAAGTAACTACACGCAGCTGAATTGTGTAAGATCGTGGGAATTCAGTGGTGATGATATTAGAGATAAAGTCAAAAGTCTCTTGTGGATTTATGTTACTGTTCCAACCGTGATTGTTTTTATTATCATTGGTGGGTTGGTGATATTTTTCTTGCGCCGGAAAAAGAGTGGCCATATGGAGGGGCCAGAAGATGCATATCCAAGGATAGAGGATCAGATTCAATATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAAAGGAAATAACAAAAGCAACTGGCGGATTCAGCCCTCAAAACAAGCTTGGACAAGGAGGGTTTGGAACTGTGTATAAGGGGCTATTGGAGAATAAGGAGGTAGCTGTAAAGAGAGTCTCCAAGAACTCACGCCAGGGGAAGCAAGAGTTTGTGGCAGAAGTGACAACAATCGGAAGCCTTCACCATAGAAATTTGGTGAAACTCACTGGTTGGTGCTATGAGAATAGAGAGCTCCTCCTTGTGTACGAGTTCATGCCTAATGGCAGCCTAGACAAGTACCTCTTTGGTGAAATATTTTTTGGTAATTGTGGGGTTGAAGGAGGGTATTCTCTGACACTGGATTGGGAAACTAGGCACAGAGTGATACATGGGGTGGCTCAAGCACTTGACTACCTTCACAATGGGTGTGAGAAGAGGGTTCTCCACAGAGACATCAAGGCCAGCAACATAATGCTGGACTCAGATTACAATGCCAAGTTGGGAGACTTTGGATTGGCTAGAACAATTGAGCAGAGAAATGAAACACATCACTCTACAAAAGAGATTGCAGGCACACCCGGGTACATGGCCCCTGAAACCTTTCTGACTGGAAGGGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAGAGGCCAGGGAATGTGTATGCACAAGATGACTACAAGAACAGCATTGTGTACTGGGTGTGGGATCTGCATGGGAAGGGAAAAGTGGTTGGTGGTGTTGATGGAAGGTTGGAGAAGGAGAAGATTAAGGAGGAGGAGGTGGAGTGTGTTCTTGTTCTTGGCTTGGCTTGTTGCCATCCAAACCCACACCAAAGACCATCCATGAGAACTGTCCTTCAGGTTCTGAATGGGGAAGCACCACCACCTGAAGTGGCTAAGGAAAGACCAGCTTTTATGTGGCCTGCTATGCCTCCATCCTTCAAAGAAGCTGAAGATAGCTCTCTCATCCAGGGAACACTCACTCCTTTCACTGAAATCACTGGAAGGTGA 2013 0.4391 MQLPWLVKYQYAATLLVTIALTKVTCFHFNFPTFQPQDESNLLLHKNAKIYLDAIQVTPDIRGPIHNYSGRAFYKKPYQLWKQKKNQNQIASFNTTFVLNITPQTTPGGEGLAFILTSDTTLPENSDGEWLGIVNATSNGTSQAGILAVEFDTRHSFTEDGPDNHVGININSINSIQQVSLLNARVNLSSGQDVKFHIQFFNDIISVFGSMNGTSEDSMETLLVTPPLNISSFLQQEVYLGFSGSTSNYTQLNCVRSWEFSGDDIRDKVKSLLWIYVTVPTVIVFIIIGGLVIFFLRRKKSGHMEGPEDAYPRIEDQIQYSSMAPKKFRLKEITKATGGFSPQNKLGQGGFGTVYKGLLENKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYENRELLLVYEFMPNGSLDKYLFGEIFFGNCGVEGGYSLTLDWETRHRVIHGVAQALDYLHNGCEKRVLHRDIKASNIMLDSDYNAKLGDFGLARTIEQRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPGNVYAQDDYKNSIVYWVWDLHGKGKVVGGVDGRLEKEKIKEEEVECVLVLGLACCHPNPHQRPSMRTVLQVLNGEAPPPEVAKERPAFMWPAMPPSFKEAEDSSLIQGTLTPFTEITGR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04040 670 SUPERFAMILY Protein kinase-like (PK-like) 321 623 IPR011009 -
Phac7g04040 670 Gene3D - 25 271 - -
Phac7g04040 670 ProSitePatterns Protein kinases ATP-binding region signature. 346 367 IPR017441 GO:0005524
Phac7g04040 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Phac7g04040 670 CDD lectin_legume_LecRK_Arcelin_ConA 27 261 IPR001220 GO:0030246
Phac7g04040 670 Gene3D Phosphorylase Kinase; domain 1 325 414 - -
Phac7g04040 670 CDD STKc_IRAK 346 625 - -
Phac7g04040 670 ProSiteProfiles Protein kinase domain profile. 340 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04040 670 Pfam Protein kinase domain 343 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04040 670 FunFam probable L-type lectin-domain containing receptor kinase S.5 415 629 - -
Phac7g04040 670 FunFam Probable L-type lectin-domain containing receptor kinase S.5 26 269 - -
Phac7g04040 670 FunFam Probable L-type lectin-domain containing receptor kinase S.5 325 414 - -
Phac7g04040 670 SMART serkin_6 340 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04040 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 265 IPR013320 -
Phac7g04040 670 PANTHER - 56 630 - -
Phac7g04040 670 Gene3D Transferase(Phosphotransferase) domain 1 415 630 - -
Phac7g04040 670 Pfam Legume lectin domain 28 268 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04040 Phac-Chr7 40665262 40667580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04040 16 639 Receptor kinase-like Gene Family AT5G55830 35.982 2.02e-119 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac7g04040 Pkinase 4.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04040 - - gmx:100785031 1106.66