Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04016 ATGAACGAGTACAAGATTGACTGTGTTGGACGGATTCAACAAAGCTATGCTCTAAATGGGGATTTGAGTTCAGAGTTTAGCAATTGTTCTAGTCAATATTTTGATATTATACAGGCTTCAAATATGGGAACTTGCAATCAGCCACTTGCTATGGTGAGTGGTGAAGGAGTGGAACATGAACCACACATAGGCCAAACCAAATCATCTAGCAGCATTATCAGCCGTTTTGAGTCACCAGCTTCAGCCTTTTATGCAACAGAAATCTGCATGGGTTTCCCACAATATGATAGATTAGTTGGTAACCCCTCTTTCATATCTCAATTCTCTAAGATCAGTGATGTGGAATTCCCTTTGTATCAATCTCCCAGGCAAAACCTTTTCTTGGCTTCATTGGCAAACCAACCTGCCCCCAACTTTGAGTTGTCAAATCCCTTGCAAGCAATGCTCTTATCTCATTTGAATGGTGATCAATGTGTTAGATCTCCTGAAAAATCTCATAAAATCCCATGTGGGAATTTCCCTGGCAGCAGTTTTCTTCCAATTGAACAACCCAAGTTGTTCATTGATGATGCTGCAAGCCCTTCAATTCCATCTAAAGGAAATCAGGATCAAACAGATTCTTGTGGCTCATACAATTTACCTGCTGCACAGATTAGCTTCTCTTCTCAGCAAGAGATGCTGTCACCTCCACTCTCAGCAGGTAGCTTGTTAACTTCTGGAAACTCTACTTCAAATGGACCAGTAAGTAAAACAAGAATAAGATGGACTCAGGAACTTCATGAGCAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAAGCAACGCCAAAAGCTATATTAAGGCTGATGGAATCAGATGGTTTGACCATCTTCCATGTTAAAAGTCATTTGCAGAAATATAGAATTGCCAAATACATGCCACAATCAACTCAAGGGAAATCCGAGAAAAGAATCAATGTAGAGAATGTGCATCTTGATGCCAAAACTGGACTGCAAATTAGAGAGGCACTTCAGTTGCAGCTAGATGTTCAGAGGCGCCTTCATGAACAACTAGAGATTCAGAGAAAATTACAGTTGAGGATTGAGGAGCAAGGTAAGCAGCTGAAAATGATGTTTGACCAGCAGCAGAAGACAAGTGATAGCAACTTGAGTACTCAGAATTTGGGAAATACAACTAATAATGACAGAACTATTAGTTCTAAAGATGTTCAGGTTTCCATTTCTGAAGGGTCTGAAAAATTCCTCATTCCTTCCAACATAACTTAG 1272 0.4033 MNEYKIDCVGRIQQSYALNGDLSSEFSNCSSQYFDIIQASNMGTCNQPLAMVSGEGVEHEPHIGQTKSSSSIISRFESPASAFYATEICMGFPQYDRLVGNPSFISQFSKISDVEFPLYQSPRQNLFLASLANQPAPNFELSNPLQAMLLSHLNGDQCVRSPEKSHKIPCGNFPGSSFLPIEQPKLFIDDAASPSIPSKGNQDQTDSCGSYNLPAAQISFSSQQEMLSPPLSAGSLLTSGNSTSNGPVSKTRIRWTQELHEQFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPQSTQGKSEKRINVENVHLDAKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTSDSNLSTQNLGNTTNNDRTISSKDVQVSISEGSEKFLIPSNIT* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04016 423 SUPERFAMILY Homeodomain-like 248 304 IPR009057 -
Phac7g04016 423 Coils Coil 336 356 - -
Phac7g04016 423 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 233 397 IPR044848 GO:0003700
Phac7g04016 423 Pfam MYB-CC type transfactor, LHEQLE motif 333 380 IPR025756 -
Phac7g04016 423 NCBIfam myb-like DNA-binding domain, SHAQKYF class 250 305 IPR006447 GO:0003677
Phac7g04016 423 FunFam Myb family transcription factor 249 307 - -
Phac7g04016 423 Gene3D - 249 308 - -
Phac7g04016 423 Pfam Myb-like DNA-binding domain 254 303 IPR001005 -
Phac7g04016 423 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 249 307 IPR017930 -
Phac7g04016 423 MobiDBLite consensus disorder prediction 229 249 - -
Phac7g04016 423 MobiDBLite consensus disorder prediction 375 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04016 Phac-Chr7 40494649 40497919 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04016 237 377 G2-like Transcription Factor Family AT4G28610 58.333 1.89e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac7g04016 Myb_DNA-binding 5.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04016 - - gmx:102668541 637.491