Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04014 ATGAGTTCTGGTTCAGTCACCAAGGCACCACCCTCTTCCTCCTCCTCACCCAACTCTTCCACTGAGTCCCTTGATGGCTTGAAGTTTGGCCAGAAAATCTACTTTGAGGATGTGAGTGTTGCAGCTGCAGCAACAACTCAAGGGACCAAAACAAGTGGTGGGATTTCATCTTCCTCTTCTTCAAAGAAGGGAAGGGGTGGTTCAGTTCAACCAGCTCAGCCTTCTAGATGTCAGGTTCAGGGTTGCAATGTAGATCTGAGTGGAGCTAAGGCTTACTATTCCAGGCACAAGGTTTGTGCCATGCACTCCAAGTCCCCAACTGTCATTGTGGCTAGTTTGGAACAAAGGTTTTGCCAACAGTGTAGCAGGTTTCATATGCTTTCTGAATTTGATCAAGGAAAGCGAAGCTGCCGCCGGCGACTTGCTGGCCATAATGAGCGCCGGCGAAAGCCTCCACCCAGCTCCATATTAACCTCTCGCTATGATAACAATGGCAGAGCTGGTAGCTTTCTGATGGAATTTGCTTCATATCCAAAGCTTTCATTGAGAAACACCTTGCCAAGTCCAAGATCAGACGAGCCACTACCTGGAAACCATGGTGCAGCACTAACCTGGCAGGCCAGTTCAGACACAGCATCTGAATTTTTGGTGCATGGATCAGGGAGTGGTGGAACAAGCTTCCTTGGTTCCAAACATCCTTTAGTGGAAAGCTACACCACTGACTCAAACTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGTTCCAGGACCCCACAACCTAGTGTTGAGCTCAACAACAACAACCACAACTTGTTGAATTTCAATGGGAGCTCCATGGCACAATTCACTGCTGCTTCCTCACAAGTTGCAGCCATCCATCAACTTCCAAATGCCACCTCATGGTACCTGAAGGCCGTTGACTCGCCGGAGGATGTTCCCGATCTCGGCCTTGGCCAAATTTCGCCGTCTCTTCATAGCCATCTTCATGGTGAGCTTGATGTGCCACATCAGGGTAGGCACTACATGGATCTTGAGGAATCCAGGGCCTGTGAGTCTTCTCACTGGTCACTTTAA 1077 0.4903 MSSGSVTKAPPSSSSSPNSSTESLDGLKFGQKIYFEDVSVAAAATTQGTKTSGGISSSSSSKKGRGGSVQPAQPSRCQVQGCNVDLSGAKAYYSRHKVCAMHSKSPTVIVASLEQRFCQQCSRFHMLSEFDQGKRSCRRRLAGHNERRRKPPPSSILTSRYDNNGRAGSFLMEFASYPKLSLRNTLPSPRSDEPLPGNHGAALTWQASSDTASEFLVHGSGSGGTSFLGSKHPLVESYTTDSNCALSLLSNQTWGSRTPQPSVELNNNNHNLLNFNGSSMAQFTAASSQVAAIHQLPNATSWYLKAVDSPEDVPDLGLGQISPSLHSHLHGELDVPHQGRHYMDLEESRACESSHWSL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04014 358 MobiDBLite consensus disorder prediction 46 75 - -
Phac7g04014 358 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 303 IPR044817 GO:0003677
Phac7g04014 358 MobiDBLite consensus disorder prediction 140 162 - -
Phac7g04014 358 Pfam SBP domain 77 150 IPR004333 GO:0003677
Phac7g04014 358 ProSiteProfiles Zinc finger SBP-type profile. 74 151 IPR004333 GO:0003677
Phac7g04014 358 FunFam Squamosa promoter-binding-like protein 14 68 138 - -
Phac7g04014 358 SUPERFAMILY SBT domain 75 156 IPR036893 GO:0003677|GO:0005634
Phac7g04014 358 Gene3D - 67 138 IPR036893 GO:0003677|GO:0005634
Phac7g04014 358 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04014 Phac-Chr7 40474338 40478954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04014 27 358 SBP-box Gene Family AT2G42200 40.318 2.30e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac7g04014 SBP 5.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04014 - - gmx:100789301 506.138