Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04008 ATGGTTTGCAACTACGTCTGCGTGAATCTCGCACTCGTTGTCTTCTCGGCAACTTTGATTTCTTGGTGCTTCGCATTTACGGATCCCGCTGACGTCGCAGCTCTTCAGGATCTGTACACGACCTTGAACAACCCTCTGGCGCTGAAAGGATGGGACGGTAATGATCCTTGTGAGGAATCTTGGACGGGAGTAGCATGTTCTGGGTCATCAGTTATACACCTCAAAATTCAAGGATTAAACCTTACCGGGTATCTTGGAAGCTTCCTCGATAATCTACAAAACTTAAAGCAACTTGATGTCAGTTTTAACAACATACTCGGTGAAATCCCTCAGGGTTTACCTCCGAATGCTACACATATAAATATGGCTTGCAATTATTTCAGCCAAAATATCCCCCATTCGTTGTCAACAATGACAAAACTAAGACACCTGAATTTAAGCCACAATTTCTTGTATGGACCCATTGGCAATGTGTTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCGTACAATAATTTCACCGGTGATCTGCCAAGTTCATTTGGTTCCTTGACAACCCTGGATAGATTATTCCTGCAGAATAACAGATTCACCGGATCAGTCACCTACCTGGCTCAGCTTCCACTGATAGATTTGAACATTCAAGACAATCTCTTTAGCGGCCTTCTTCCACAGCATTTTCAGTCCATACCAAACTTATGGATTGGAGGGAATAAGTTCCAAAGAGTGGACGACTCTCCTCCCTGGGCATTTCCTTTGGACAACGTACCCCTTGAGCAAAACACTAGTCGCCCACCCATAACTCAGGCAAACGCCATTGAGAACTACGCTCCTATTAGAGTAAGGAAACAAAAGAAGAAACGTATCGGTCCCGGAGGAATAGCTTTTATGGTCGGTACAGGAACATTATTGGCAACAGGTTTCGCTCTTTTCATTGCGATCCGTTTGAATAAGCTTTATTCAAAGAGACTGGAGAACTATGAAAGCGACCATAGTTCATTGTCTTCTAATCCAATCAGTGCAACCAAAGAAGATTCTACTACGGCAATAGATGAGAGCCTGCAAATCCCACCCTATAATGCTGCATCCCTTTTGGGTCCAAGGCGATTAACTTCCCAAACCCATAAAAGAACTGGGGAAACATCAAGAAAGAGTTTTTCCGGAAGAGACAGATTCAATGGAAGGACAAGGGTTTATACAGTAGCGGAGGTTCAGTTGGTTACAAACAGTTTCCATGAAGACAACCTTCTGGGAGAAGGATCCCTTGGTCCTGTTTATAGAGCTGAATTTCCAGATAATAAGGTTTTAGCCGTGAAGAATATCAACATGGCGGGCATGTCTTTCAGTGAAGAAGAAAAGTTCTTAGATGTCGTGTGCACGGCTTCCCGTTTGAAGCACCCTAACATTGTTTCACTTAAAGGCTACTGTTTGGAGCATGGACAACATCTTCTTGTCTTTGACTATGTCAGAAATTTAACTCTAGATGATGCTCTTCATAGTACATCATACAAACCTCTATCGTGGGGCGCACGTCTCCAGATCGCCCTAGGCGTTGGTCGGGCCCTGGACTATTTGCACTCGACGTTCTCCCCTCCTGTCGTCCATGGCAAATTAAAGGCTACCAATGTTCTTCTGGACGAAAACCTCATGCCTCGTGTTACTGACTCTGGCTTGGCTATTCTGAGACCACTGACAAGCAATAAAGTCAAAAACCGGGCTTCCGAGATTGATATTAGAGATACAGGATACAGTTCCCCTGACCATGACCAACCGGGAATTAGCAGCACGAAGAGCGACATATTTGCCTTTGGAGTGTTGCTTCTTGAACTATTAACAGGAAGAAAACCTTTCGATGGTTCCAGGCCAAGGGAAGAGCACTATCTGGCAAAGTGGGCTTCATCAAGGCTTCATGATAGTGACAGTTTGGAACAGATGGTGGATCCAGCAATCAAACGGACATTTTCATCCAAAGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGCATTCAGCCCGTAAAGGAATTTCGACCTCCAATGTCTGAAATCGTGAACAATCTAGTATCATTTTCTCGAAAGCTTGATCCACTTGAAATTGAAAGGTCTTTTCACACAACCAGCTCCCGCTTTAACGGTTCACCCGCTCTGAGCTATGTATCCGCCTGA 2172 0.442 MVCNYVCVNLALVVFSATLISWCFAFTDPADVAALQDLYTTLNNPLALKGWDGNDPCEESWTGVACSGSSVIHLKIQGLNLTGYLGSFLDNLQNLKQLDVSFNNILGEIPQGLPPNATHINMACNYFSQNIPHSLSTMTKLRHLNLSHNFLYGPIGNVFTGLDNLKEMDLSYNNFTGDLPSSFGSLTTLDRLFLQNNRFTGSVTYLAQLPLIDLNIQDNLFSGLLPQHFQSIPNLWIGGNKFQRVDDSPPWAFPLDNVPLEQNTSRPPITQANAIENYAPIRVRKQKKKRIGPGGIAFMVGTGTLLATGFALFIAIRLNKLYSKRLENYESDHSSLSSNPISATKEDSTTAIDESLQIPPYNAASLLGPRRLTSQTHKRTGETSRKSFSGRDRFNGRTRVYTVAEVQLVTNSFHEDNLLGEGSLGPVYRAEFPDNKVLAVKNINMAGMSFSEEEKFLDVVCTASRLKHPNIVSLKGYCLEHGQHLLVFDYVRNLTLDDALHSTSYKPLSWGARLQIALGVGRALDYLHSTFSPPVVHGKLKATNVLLDENLMPRVTDSGLAILRPLTSNKVKNRASEIDIRDTGYSSPDHDQPGISSTKSDIFAFGVLLLELLTGRKPFDGSRPREEHYLAKWASSRLHDSDSLEQMVDPAIKRTFSSKALSRYADIISLCIQPVKEFRPPMSEIVNNLVSFSRKLDPLEIERSFHTTSSRFNGSPALSYVSA* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04008 723 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Phac7g04008 723 MobiDBLite consensus disorder prediction 331 350 - -
Phac7g04008 723 Pfam Protein tyrosine and serine/threonine kinase 416 689 IPR001245 GO:0004672|GO:0006468
Phac7g04008 723 SUPERFAMILY L domain-like 33 244 - -
Phac7g04008 723 Pfam Leucine Rich Repeat 140 153 IPR001611 GO:0005515
Phac7g04008 723 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 692 IPR046959 -
Phac7g04008 723 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 253 - -
Phac7g04008 723 MobiDBLite consensus disorder prediction 332 350 - -
Phac7g04008 723 Gene3D Phosphorylase Kinase; domain 1 373 490 - -
Phac7g04008 723 Pfam Leucine rich repeat 158 199 IPR001611 GO:0005515
Phac7g04008 723 ProSiteProfiles Protein kinase domain profile. 413 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g04008 723 Gene3D Ribonuclease Inhibitor 28 263 IPR032675 -
Phac7g04008 723 MobiDBLite consensus disorder prediction 367 390 - -
Phac7g04008 723 FunFam Leucine-rich repeat receptor-like protein kinase 491 698 - -
Phac7g04008 723 Gene3D Transferase(Phosphotransferase) domain 1 492 707 - -
Phac7g04008 723 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 490 - -
Phac7g04008 723 MobiDBLite consensus disorder prediction 375 390 - -
Phac7g04008 723 SUPERFAMILY Protein kinase-like (PK-like) 390 689 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04008 Phac-Chr7 40454230 40459783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04008 10 723 Strubbelig Receptor Gene Family AT5G06820 54.110 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Phac7g04008 PK_Tyr_Ser-Thr 8.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04008 - - vum:124845744 1266.52