LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac7g04008	ATGGTTTGCAACTACGTCTGCGTGAATCTCGCACTCGTTGTCTTCTCGGCAACTTTGATTTCTTGGTGCTTCGCATTTACGGATCCCGCTGACGTCGCAGCTCTTCAGGATCTGTACACGACCTTGAACAACCCTCTGGCGCTGAAAGGATGGGACGGTAATGATCCTTGTGAGGAATCTTGGACGGGAGTAGCATGTTCTGGGTCATCAGTTATACACCTCAAAATTCAAGGATTAAACCTTACCGGGTATCTTGGAAGCTTCCTCGATAATCTACAAAACTTAAAGCAACTTGATGTCAGTTTTAACAACATACTCGGTGAAATCCCTCAGGGTTTACCTCCGAATGCTACACATATAAATATGGCTTGCAATTATTTCAGCCAAAATATCCCCCATTCGTTGTCAACAATGACAAAACTAAGACACCTGAATTTAAGCCACAATTTCTTGTATGGACCCATTGGCAATGTGTTTACTGGCTTAGATAATCTCAAAGAAATGGACCTTTCGTACAATAATTTCACCGGTGATCTGCCAAGTTCATTTGGTTCCTTGACAACCCTGGATAGATTATTCCTGCAGAATAACAGATTCACCGGATCAGTCACCTACCTGGCTCAGCTTCCACTGATAGATTTGAACATTCAAGACAATCTCTTTAGCGGCCTTCTTCCACAGCATTTTCAGTCCATACCAAACTTATGGATTGGAGGGAATAAGTTCCAAAGAGTGGACGACTCTCCTCCCTGGGCATTTCCTTTGGACAACGTACCCCTTGAGCAAAACACTAGTCGCCCACCCATAACTCAGGCAAACGCCATTGAGAACTACGCTCCTATTAGAGTAAGGAAACAAAAGAAGAAACGTATCGGTCCCGGAGGAATAGCTTTTATGGTCGGTACAGGAACATTATTGGCAACAGGTTTCGCTCTTTTCATTGCGATCCGTTTGAATAAGCTTTATTCAAAGAGACTGGAGAACTATGAAAGCGACCATAGTTCATTGTCTTCTAATCCAATCAGTGCAACCAAAGAAGATTCTACTACGGCAATAGATGAGAGCCTGCAAATCCCACCCTATAATGCTGCATCCCTTTTGGGTCCAAGGCGATTAACTTCCCAAACCCATAAAAGAACTGGGGAAACATCAAGAAAGAGTTTTTCCGGAAGAGACAGATTCAATGGAAGGACAAGGGTTTATACAGTAGCGGAGGTTCAGTTGGTTACAAACAGTTTCCATGAAGACAACCTTCTGGGAGAAGGATCCCTTGGTCCTGTTTATAGAGCTGAATTTCCAGATAATAAGGTTTTAGCCGTGAAGAATATCAACATGGCGGGCATGTCTTTCAGTGAAGAAGAAAAGTTCTTAGATGTCGTGTGCACGGCTTCCCGTTTGAAGCACCCTAACATTGTTTCACTTAAAGGCTACTGTTTGGAGCATGGACAACATCTTCTTGTCTTTGACTATGTCAGAAATTTAACTCTAGATGATGCTCTTCATAGTACATCATACAAACCTCTATCGTGGGGCGCACGTCTCCAGATCGCCCTAGGCGTTGGTCGGGCCCTGGACTATTTGCACTCGACGTTCTCCCCTCCTGTCGTCCATGGCAAATTAAAGGCTACCAATGTTCTTCTGGACGAAAACCTCATGCCTCGTGTTACTGACTCTGGCTTGGCTATTCTGAGACCACTGACAAGCAATAAAGTCAAAAACCGGGCTTCCGAGATTGATATTAGAGATACAGGATACAGTTCCCCTGACCATGACCAACCGGGAATTAGCAGCACGAAGAGCGACATATTTGCCTTTGGAGTGTTGCTTCTTGAACTATTAACAGGAAGAAAACCTTTCGATGGTTCCAGGCCAAGGGAAGAGCACTATCTGGCAAAGTGGGCTTCATCAAGGCTTCATGATAGTGACAGTTTGGAACAGATGGTGGATCCAGCAATCAAACGGACATTTTCATCCAAAGCTCTTTCTCGTTATGCTGATATCATCTCCCTCTGCATTCAGCCCGTAAAGGAATTTCGACCTCCAATGTCTGAAATCGTGAACAATCTAGTATCATTTTCTCGAAAGCTTGATCCACTTGAAATTGAAAGGTCTTTTCACACAACCAGCTCCCGCTTTAACGGTTCACCCGCTCTGAGCTATGTATCCGCCTGA	2172	0.442	MVCNYVCVNLALVVFSATLISWCFAFTDPADVAALQDLYTTLNNPLALKGWDGNDPCEESWTGVACSGSSVIHLKIQGLNLTGYLGSFLDNLQNLKQLDVSFNNILGEIPQGLPPNATHINMACNYFSQNIPHSLSTMTKLRHLNLSHNFLYGPIGNVFTGLDNLKEMDLSYNNFTGDLPSSFGSLTTLDRLFLQNNRFTGSVTYLAQLPLIDLNIQDNLFSGLLPQHFQSIPNLWIGGNKFQRVDDSPPWAFPLDNVPLEQNTSRPPITQANAIENYAPIRVRKQKKKRIGPGGIAFMVGTGTLLATGFALFIAIRLNKLYSKRLENYESDHSSLSSNPISATKEDSTTAIDESLQIPPYNAASLLGPRRLTSQTHKRTGETSRKSFSGRDRFNGRTRVYTVAEVQLVTNSFHEDNLLGEGSLGPVYRAEFPDNKVLAVKNINMAGMSFSEEEKFLDVVCTASRLKHPNIVSLKGYCLEHGQHLLVFDYVRNLTLDDALHSTSYKPLSWGARLQIALGVGRALDYLHSTFSPPVVHGKLKATNVLLDENLMPRVTDSGLAILRPLTSNKVKNRASEIDIRDTGYSSPDHDQPGISSTKSDIFAFGVLLLELLTGRKPFDGSRPREEHYLAKWASSRLHDSDSLEQMVDPAIKRTFSSKALSRYADIISLCIQPVKEFRPPMSEIVNNLVSFSRKLDPLEIERSFHTTSSRFNGSPALSYVSA*	724

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Phac7g04008	723	Pfam	Leucine rich repeat N-terminal domain	29	67	IPR013210	-
Phac7g04008	723	MobiDBLite	consensus disorder prediction	331	350	-	-
Phac7g04008	723	Pfam	Protein tyrosine and serine/threonine kinase	416	689	IPR001245	GO:0004672\|GO:0006468
Phac7g04008	723	SUPERFAMILY	L domain-like	33	244	-	-
Phac7g04008	723	Pfam	Leucine Rich Repeat	140	153	IPR001611	GO:0005515
Phac7g04008	723	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	19	692	IPR046959	-
Phac7g04008	723	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	28	253	-	-
Phac7g04008	723	MobiDBLite	consensus disorder prediction	332	350	-	-
Phac7g04008	723	Gene3D	Phosphorylase Kinase; domain 1	373	490	-	-
Phac7g04008	723	Pfam	Leucine rich repeat	158	199	IPR001611	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac7g04008	Phac-Chr7	40454230	40459783	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac7g04008	10	723	Strubbelig Receptor Gene Family	AT5G06820	54.110	0.0	718

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Phac7g04008		PK_Tyr_Ser-Thr	8.7e-34	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac7g04008	-		-	vum:124845744	1266.52

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