Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g04003 ATGGGGTTCTCCATAGCTATTGAATTAGAATCAGCACAAGAACAAGAGCAAGAGACAAAGTTTTTAAGCTCCTCTCTGAATATCATGGCTTCCTCAAGTGTCAAGAGCACCAACTCAACAACTCAACTTGAACCACTCCCCCCACATCTTCATCATCAACAACCACCACATCATTTTCATCATCATCAAATACCAGACCAAGAAATCTCTTTCGGGATGATGCCATCTTCCTCATCACACTCTATTCCTGCAAATTACTTAAGCAAAGATTCTGGAGCTTATGATTTGGGAGAATTGGATCAAGCCTTTTTTTTGTATCTTGACGACCCTTCTAGTGTTCAAGACCAAAGACAGAACTCATCATCAGGAATGAGGCCACCACCAACTCTCAATATTTTCCCATCTCAGCCTATGCACGCAGTGCCACCATCCAATTCCAAGGTTACCATGGAATTACCCTCCACACAAACCAGTGGCTCCAAGAGACCACCAGGGTCATCCATAGCCAAGCCCAACCCTCACACCGAAGCTCCCTCTGCACCCGAACCACCCAAAGTTGTAAAGCGAGAGGGAAATCGAAAGGGAGCAACCTCAAGTTCTGAGCAGGAAGCACCCAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGAAAAAGCAGGCTGAGGAAAAAGGCGTACGTTCAGCAGCTAGAGTCAAGTAGGATTAAGCTTAATCAGCTAGAACAAGAGTTACAGCGTGCAAGAGCTCAAGGCATATTAATGGGTGGAAATGCCCTTCTGGGAGGTGAACAAGGCTTTCCTATGGCTATGACTGGCATTAGCTCAGAGGCTGCAATGTTTGACGTGGAATATGCGAGATGGTTAGAGGAGCACCAGCGCATAGTGTGTGAGCTAAGAGGTGCAGTGCAAGAACACCTCCATGAAAACGAGCTTCGGTTATATGTGGACAATTGTTTGGCTCACTACGACCAAGTAATGAACCTGAAGACCATAGTGGCCAAAACAGACGTATTCCACCTTGTTTTTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTTATGTGGATTGGTGGCTTCAGACCCTCTGAACTCATCAAGATTATTCTGGGTCAAATTGAGCCTCTTACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCTACTCAAGAGGCAGAAGAGGCTCTTTCCCAAGGGCTTGATGCCCTAAACCAATCTCTCTCAGACACTATAACATCAGACTCTTTGTGGTGTCCTCCAAACATGACTAATTACATGGGACAGATGGCTGTGGCAATGAACAAACTCTCCACTCTTGAAAGTTTTGCAAGACAGGCTGATAATCTGAGGCACCAAACCATTCACCGTCTGCACCAACTTCTAACCACACGCCAAGCCGCAAGGTGTTTGGTGGCCATTTCTGAGTACTTTCATCGTCTTCGAGCTCTCAGTTCTCTCTGGTTCACACGTCCTCGCCAAGACTAG 1509 0.4619 MGFSIAIELESAQEQEQETKFLSSSLNIMASSSVKSTNSTTQLEPLPPHLHHQQPPHHFHHHQIPDQEISFGMMPSSSSHSIPANYLSKDSGAYDLGELDQAFFLYLDDPSSVQDQRQNSSSGMRPPPTLNIFPSQPMHAVPPSNSKVTMELPSTQTSGSKRPPGSSIAKPNPHTEAPSAPEPPKVVKREGNRKGATSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGILMGGNALLGGEQGFPMAMTGISSEAAMFDVEYARWLEEHQRIVCELRGAVQEHLHENELRLYVDNCLAHYDQVMNLKTIVAKTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSDTITSDSLWCPPNMTNYMGQMAVAMNKLSTLESFARQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLRALSSLWFTRPRQD* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g04003 502 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 214 229 IPR004827 GO:0003700|GO:0006355
Phac7g04003 502 SMART brlzneu 207 273 IPR004827 GO:0003700|GO:0006355
Phac7g04003 502 PANTHER TRANSCRIPTION FACTOR TGA9 120 501 - -
Phac7g04003 502 SUPERFAMILY Leucine zipper domain 211 253 IPR046347 GO:0003700|GO:0006355
Phac7g04003 502 ProSiteProfiles DOG1 domain profile. 284 498 IPR025422 GO:0006351|GO:0043565
Phac7g04003 502 MobiDBLite consensus disorder prediction 112 214 - -
Phac7g04003 502 MobiDBLite consensus disorder prediction 138 165 - -
Phac7g04003 502 Coils Coil 230 257 - -
Phac7g04003 502 FunFam BZIP family transcription factor 210 259 - -
Phac7g04003 502 Gene3D - 210 260 - -
Phac7g04003 502 Pfam bZIP transcription factor 211 249 IPR004827 GO:0003700|GO:0006355
Phac7g04003 502 Pfam Seed dormancy control 302 375 IPR025422 GO:0006351|GO:0043565
Phac7g04003 502 MobiDBLite consensus disorder prediction 112 129 - -
Phac7g04003 502 CDD bZIP_HBP1b-like 211 263 - -
Phac7g04003 502 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 209 253 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g04003 Phac-Chr7 40400955 40408872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g04003 84 502 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.896 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac7g04003 DOG1 9.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g04003 K14431 - gmx:100800059 855.129