Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03988 ATGGAGCAAACCACGCTTGAAGCCATTCAGTTCAACGAGGAAATCCAAGGCATCATAGCTCCGGCGCCGGAAACCGCAAGTTCCTTCACCGCACTGCTGGAGCTCCCGCCGACGCAGGCCGTCGAGCTCCTCCACTCGCCGGAGCGAGCCGGGAAACCACCGCGCCATAATCCGAAACCCTACCCGTTGACCTCATTTGCCTCCGCCTCCGCCGCCAACCTGACCTTCCCGTCAAACGCCGCGCTGATCGAGCGCGCCGCCAGGTTCTCCATCTTCGCCGGAGAGAATTCTAACTCGAACTCGAACTCGCCGGAGGTTAAGCGAGAGCTGCCGGAGACCGATTCCAACCCGAGTTCGACTCAGGGCGGCGGCTCCGCCTCCGATCCCACCCTGGAGAACAAGGATGAGAAGGGCCTGAAGAGGAAGGAGCGAGAGAAGAAGGTTAAGGCGTCGTCGAAGAAGAGCAAGAGCGTAGTCGCTGACGAGAGTTCCGGCGACGGCGAGAAGCTTCCGTATGTTCACGTTCGAGTTCGTCGAGGTCAAGCCACTGATAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGGATGAAGCTTTTGCAAGAGCTGGTCCCGGGTTGCAACAAGATATCAGGAACAGCATTGGTTCTGGATAAAATCATCAACCATGTTCAATCTCTACAGCATGAAGTGGAGATATTATCAATGAAACTGGCAGCAGTAAACCCAGTAATTGAGTTCAACCTTGACAGCTTATTGGCTACCGAAGTAAGTATAATATTTTTTCCTTTTGTCTTTGCTGGGAGTCATCTGAAGTACATGGGTTATGGGTCCTCTCATTTACACGATAGATCATGTATAAATCTTGTACCATCTTTCTCCTAA 897 0.5273 MEQTTLEAIQFNEEIQGIIAPAPETASSFTALLELPPTQAVELLHSPERAGKPPRHNPKPYPLTSFASASAANLTFPSNAALIERAARFSIFAGENSNSNSNSPEVKRELPETDSNPSSTQGGGSASDPTLENKDEKGLKRKEREKKVKASSKKSKSVVADESSGDGEKLPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEVEILSMKLAAVNPVIEFNLDSLLATEVSIIFFPFVFAGSHLKYMGYGSSHLHDRSCINLVPSFS* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03988 298 MobiDBLite consensus disorder prediction 94 166 - -
Phac7g03988 298 Pfam Helix-loop-helix DNA-binding domain 185 232 IPR011598 GO:0046983
Phac7g03988 298 SMART finulus 187 237 IPR011598 GO:0046983
Phac7g03988 298 MobiDBLite consensus disorder prediction 130 166 - -
Phac7g03988 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 231 IPR011598 GO:0046983
Phac7g03988 298 FunFam transcription factor bHLH48-like isoform X1 178 250 - -
Phac7g03988 298 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 89 269 IPR024097 GO:0006355
Phac7g03988 298 MobiDBLite consensus disorder prediction 113 128 - -
Phac7g03988 298 Gene3D - 178 250 IPR036638 GO:0046983
Phac7g03988 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 179 249 IPR036638 GO:0046983
Phac7g03988 298 CDD bHLH_AtBPE_like 171 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03988 Phac-Chr7 40303733 40311630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03988 2 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 53.381 6.44e-75 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac7g03988 HLH 3.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03988 - - gmx:100799133 385.185