Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03977 ATGGAGAGAACCCAAAATCCAGAGCCACGTTACCCTAAACGTGCAACAAGTTCTCGAGGAGGCTTCTGGAATAGTTCTTCTCTAACCCTAAATTTCACAAAAAATGAAGTCCTCATTCCAGTCTCCAAACATGATCAAGGAACCCAATTTCCTTCAAGCTTAGTACCAATGGAAAAAGAACCACAACAAACCAGGATGGTTGTCTCAGAAGAAATTGACTTCGGATTGAAAGAACAGGTTAAGCGAAAACGATATCGTAAACGGAATTTCAAGAAAACAACCTCTATTTATCGAGGAGTGACAAGGTGTAAGGGACGTTTTGAATCCTTTGTTTGGGATAAGGATCTCAAAACAACTGGAAAAAGAGGAAAGACAGGTGGATTTAAGGATGAACTTGAAGCAGCAAGAGCTCACGATTTGATTGCCATTAAGATATGGGGCAAGTTTGCATATACAAATTTTCCAGCGAATTTCTATTTGAAGGAGATCTCAGAAATGCAACAAATGAATCTAAGAGAATATATTCTTACAGTCAGAAGGGGCCAAACTTCAACTACTGCTACTGATGGCTCTAACACCTCCAGTGCTAATGCTGGAACTTCACCTGAAGTGCAAGAAAACAGTGGTGATGCATTGATAAAAACTGAATCCAGCACAGTGCAATCAATGTTTCATGACATTGGTGAACAATCTCAAGCACCAACAACTTTGCAAAAGCAAGATGAGAATGTTGAGGAGAACAAATATCTGTATGATGATGAGTATGCATGGTTAGATTTTGACCTAACTTCCCCTCTTTGGTCATGTGATTTTGGCAGCACACAGGTTGAGGAGCATGCAAATGCTTTAGGCAATGAAAACCCAGCAGGAGCAGGAAATGGCAGTGTTGGTTCATTTGGGTCAAGTTCTGTGGAGGTCCCTGCAATGGAGAGTAATAATATTGAGCAATTTGAAGAACAAAACCCAGATGTTGCATCTGTTCATAGGTATGATCCTCTCCAATGTGGATCTGCAACAAACACCCAAAATGAGAATATAGTTGCTGACAACGATTGGGATATAACCCAATATCTGAATCTCGATTTCCCTGACATGGATGATTAG 1104 0.4031 MERTQNPEPRYPKRATSSRGGFWNSSSLTLNFTKNEVLIPVSKHDQGTQFPSSLVPMEKEPQQTRMVVSEEIDFGLKEQVKRKRYRKRNFKKTTSIYRGVTRCKGRFESFVWDKDLKTTGKRGKTGGFKDELEAARAHDLIAIKIWGKFAYTNFPANFYLKEISEMQQMNLREYILTVRRGQTSTTATDGSNTSSANAGTSPEVQENSGDALIKTESSTVQSMFHDIGEQSQAPTTLQKQDENVEENKYLYDDEYAWLDFDLTSPLWSCDFGSTQVEEHANALGNENPAGAGNGSVGSFGSSSVEVPAMESNNIEQFEEQNPDVASVHRYDPLQCGSATNTQNENIVADNDWDITQYLNLDFPDMDD* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03977 367 SUPERFAMILY DNA-binding domain 95 157 IPR016177 GO:0003677
Phac7g03977 367 CDD AP2 95 157 IPR001471 GO:0003700|GO:0006355
Phac7g03977 367 ProSiteProfiles AP2/ERF domain profile. 96 155 IPR001471 GO:0003700|GO:0006355
Phac7g03977 367 SMART rav1_2 96 161 IPR001471 GO:0003700|GO:0006355
Phac7g03977 367 MobiDBLite consensus disorder prediction 1 20 - -
Phac7g03977 367 Gene3D AP2/ERF domain 96 157 IPR036955 GO:0003700|GO:0006355
Phac7g03977 367 MobiDBLite consensus disorder prediction 182 208 - -
Phac7g03977 367 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 65 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03977 Phac-Chr7 40267127 40270768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03977 56 180 AP2-EREBP Transcription Factor Family AT1G72570 39.394 5.65e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03977 K09285 - pvu:PHAVU_007G2562001 325.094