Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac7g03973 ATGGAGAGTAGTGCCAAGGTGGAAGACTATGAAGTGATTCGGCAAATTGGAAGAGGAGCACTTGGTGCAACTTTTCTTGTTCTACACAAGATTGAGAAAAAGAGGTATGTGCTGAAGAAAATTCGCTTGTCCAAACAAGCTGACAAATCCAAAGTGACAGCACAACAAGAGATGGACCTGATAGCTAAACTAAATTACCCTTATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGATTACATATGCATTATAACCGGCTATTGCGAAGGGGGTGACATGGCTGCTAACATAAAGAAAGTTCGGGGATCTTATTTTTCGGAGGAGAAAGTCTGCAAATGGTTGACTCAGTTGTTACTAGCTGTGGACTACCTTCACTCCAATCGCGTACTCCACAGAGATGTTAAGTGTTCCAACATATTCCTTACCAAAGAAAATAACATTCGATTAGGTGAATTTGGTCTTGCGAAGCTTCTCAATACTGAAGACCTCACTTCTCCGGCTTTTGGAACTCTAAACTACATGTGTCCTGAGGCATTTGCTGGTATGCCTTACGGTTATAAATCTGATATGTGGTCACTTGGTTGCTGCATGTTTGAAATTGTTGCACATCAACTAGCATTTCGTGCTCCAGACAGGACTGGACTTATCAATAAAATAAATAGATGCTCCATTTCTCCACTACCAATTGTTTACTCGTCCACACTGAAACAACTTATCAAGAGCATGCTGAGGAAAAACCCTGAACACAGACCAACAGCATCTGAATTATTAAGGCATCCTCATTTACAACCTTATGTTCTACGCTGTCATAATGCTTCATCTATTTATCTACCAGTACATCTTATAAATAGTAACTCCCCGAAGGATAAAACTAAAAACAAATCTAGTGGTAGCAAAGACCATTGGGATAAGGAAGCAGGATTGGCTGGATTAGTAAATCGTTTGGACCGAATTTATTCATTTGAGGGAAATGGAGATGTACAGACACGGAACCAGCACAATGAGGGCAAGGTAGCAGTGCCAACCAAAGACAACCTTGAGACCAAAATGGTTGACTCTACCAGCTACACTCTGGAATTTTCTACAAGTATTAGTGGCTCGAAAGATGGCTCTACAACATCTGAATCAACCGTTTGCAGTGTGAGTAAGGAAGGAGACTTTAAAAATAGACTTGCAAGGAACATAGCTGACAGTGAGATCACTTCAAAAAGTACAATAGATTGTGTGCATGAAGAACAAGGACTTACTACCCTTAAGTCATATGCAATTGACATAAATACAGTAATTAAAAATGTTGAAGATATTTTTTCCAATGAAGATCTCAATGCAGATGAAGCACTGAGTGAAGGTGCCAAACCTGGGGATTCCAGTAAATCCACAATGTCCAGTGAAGGCAGCAACGGTAATGATAAAGATGAGTCCATTGATGAGATCATGTCAAAGAGTACCCTTGTTTCTGTGCATGAAGAGCAAGGATTTACGACGGATCATTTTCAGAAGTCAGATGTGATTGACCCAAGCGCAGTATCTACAGAAGTTGAAGATAATTTTTCCAATGAAGGTTTTGATAAAATGGAAGCAGAGAGGGAGAATGCCAAACCTGAGGACTCCAGAAAATCAATAGTGTTCATTGAAAACGGTGAAGGTAATGATAATGACGGGTCCATTGATGATATCACTTCAAAGAGTATTCTAGAATCTGTGCATGGTGAACAAGAATTTACTGCTGAACATTTTCCAGAGTCAGATGTGATTGACACGAATGCAGTGGCTACAACAGTTGAAGATAATTTTTGCAATGAAGCATTTGACCAAACTGAAACAGAGAGGAAAACTGGCAGACATGCGGACTCCAGAATATCAGTAGTGTCCAATGAAAACAGTGATGCTGATGGTAATGATAGTTCCATTAATGAGATCAGATTGAAGAGTACAACCGGTTATGTGCAAGAAGAGCAATGGTTTATAGCTGAACATGTTCAAAAGTTAGATGTTGTTGACGTAGAAGCTGCGGCTTCCGAAGATGTGGACAAAATTTCTAGTGAAGGTTTTGATAAAGCTGAAGCACAGAGGGAAGATGCCAAACTTGAGTGCCCCAGTAAATCAATAATTTCCTATGATAACAGCAATGGTAATGATGAAGATGGATCCGGTGGTGAGATCACATCAAAGAGTATGCTAGAATTTGTAGGTGAAGAACAAGGACTCACTGCTGAGCATTTTCAGCTGTCTGATGCAAATGACATAAATGCAGTGACTACAGAAGTTGAAGATAAACTTTCCAATGAAGGTTTTGATAAAGCTGAAACACAGGAGAAAGATGTTAAACCTGAGGATTCCATTAAATCTTTGTCCAGTGAAGAAGGTGGCGGCGGCGGCAGTAGTGGTGATAACGATGAATCCATTGACGAGGAAAGGTCATCATCCCCAATGGCACAACCTGTTAAGGTTGAACATGACACTGAAACTGGAAGCAGCTTGAAGGAAAATGAAAACCCTGAAGCATTTAAAGAAGGCTCACGCATGGACAGCTTGACTCTTGATAGTAAGGATGAAAACAGAGAAGAGACACATACAATCAGTTGCTCAACGTGTAAAGAAGACAACAATGGTGTTGTGTCCCATAAGCCAGAAAATGGCATTTCAGTAATGAAGCGTATTTCAAGAGGCAGTACTACTTCCTGCCTGCAAAGGGCTGAAGCTCTGGAATCTCTACTTGAGTTATGTGCACAGCTACTTCAGCAAGGAAACCTTGAAGAGCTTGCTGCTGTGCTAAGACCATTTGGAGAAGATGCCGTATCTGTGTCATCCAGAGAAACAGCAATATTGCTTACCAAAAGCCTCATGGCCTCACAAAAACTTAATCCTGAAACGTAG 2883 0.4065 MESSAKVEDYEVIRQIGRGALGATFLVLHKIEKKRYVLKKIRLSKQADKSKVTAQQEMDLIAKLNYPYIVEYKDAWVEKEDYICIITGYCEGGDMAANIKKVRGSYFSEEKVCKWLTQLLLAVDYLHSNRVLHRDVKCSNIFLTKENNIRLGEFGLAKLLNTEDLTSPAFGTLNYMCPEAFAGMPYGYKSDMWSLGCCMFEIVAHQLAFRAPDRTGLINKINRCSISPLPIVYSSTLKQLIKSMLRKNPEHRPTASELLRHPHLQPYVLRCHNASSIYLPVHLINSNSPKDKTKNKSSGSKDHWDKEAGLAGLVNRLDRIYSFEGNGDVQTRNQHNEGKVAVPTKDNLETKMVDSTSYTLEFSTSISGSKDGSTTSESTVCSVSKEGDFKNRLARNIADSEITSKSTIDCVHEEQGLTTLKSYAIDINTVIKNVEDIFSNEDLNADEALSEGAKPGDSSKSTMSSEGSNGNDKDESIDEIMSKSTLVSVHEEQGFTTDHFQKSDVIDPSAVSTEVEDNFSNEGFDKMEAERENAKPEDSRKSIVFIENGEGNDNDGSIDDITSKSILESVHGEQEFTAEHFPESDVIDTNAVATTVEDNFCNEAFDQTETERKTGRHADSRISVVSNENSDADGNDSSINEIRLKSTTGYVQEEQWFIAEHVQKLDVVDVEAAASEDVDKISSEGFDKAEAQREDAKLECPSKSIISYDNSNGNDEDGSGGEITSKSMLEFVGEEQGLTAEHFQLSDANDINAVTTEVEDKLSNEGFDKAETQEKDVKPEDSIKSLSSEEGGGGGSSGDNDESIDEERSSSPMAQPVKVEHDTETGSSLKENENPEAFKEGSRMDSLTLDSKDENREETHTISCSTCKEDNNGVVSHKPENGISVMKRISRGSTTSCLQRAEALESLLELCAQLLQQGNLEELAAVLRPFGEDAVSVSSRETAILLTKSLMASQKLNPET* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac7g03973 960 SMART serkin_6 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03973 960 MobiDBLite consensus disorder prediction 606 638 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 823 858 - -
Phac7g03973 960 Gene3D Transferase(Phosphotransferase) domain 1 92 309 - -
Phac7g03973 960 CDD STKc_Nek 9 264 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 761 785 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 620 638 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 756 858 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 529 544 - -
Phac7g03973 960 SUPERFAMILY Protein kinase-like (PK-like) 7 284 IPR011009 -
Phac7g03973 960 MobiDBLite consensus disorder prediction 455 470 - -
Phac7g03973 960 ProSiteProfiles Protein kinase domain profile. 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03973 960 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Phac7g03973 960 MobiDBLite consensus disorder prediction 704 721 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 676 700 - -
Phac7g03973 960 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Phac7g03973 960 Pfam Protein kinase domain 10 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac7g03973 960 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 8 909 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 447 477 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 676 732 - -
Phac7g03973 960 MobiDBLite consensus disorder prediction 529 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac7g03973 Phac-Chr7 40240828 40248634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac7g03973 16 293 MAP Kinase Kinase Kinase AT1G09000 28.904 1.04e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Phac7g03973 Pkinase 5.9e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac7g03973 K08857 - gmx:100818558 1180.24